RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 SLC20A2Q08357 652 aa19.16■□□□□ 0.66
HDAC4-203ENST00000445704 CNTN1Q12860 1018 aa19.16■□□□□ 0.66
HDAC4-203ENST00000445704 SFSWAPQ12872 951 aaKnown RBP19.16■□□□□ 0.66
HDAC4-203ENST00000445704 FAM46CQ5VWP2 391 aa19.16■□□□□ 0.66
HDAC4-203ENST00000445704 SARM1Q6SZW1 724 aa19.16■□□□□ 0.66
HDAC4-203ENST00000445704 ERMP1Q7Z2K6 904 aa19.16■□□□□ 0.66
HDAC4-203ENST00000445704 OR2T34Q8NGX1 318 aa19.16■□□□□ 0.66
HDAC4-203ENST00000445704 OR14C36Q8NHC7 312 aa19.16■□□□□ 0.66
HDAC4-203ENST00000445704 ARRDC3Q96B67 414 aa19.16■□□□□ 0.66
HDAC4-203ENST00000445704 HMCESQ96FZ2 354 aa19.16■□□□□ 0.66
HDAC4-203ENST00000445704 GTPBP2Q9BX10 602 aaKnown RBP19.16■□□□□ 0.66
HDAC4-203ENST00000445704 PACSIN1Q9BY11 444 aa19.16■□□□□ 0.66
HDAC4-203ENST00000445704 CEP44Q9C0F1 390 aa19.16■□□□□ 0.66
HDAC4-203ENST00000445704 CATSPERBQ9H7T0 1116 aa19.16■□□□□ 0.66
HDAC4-203ENST00000445704 ANAPC7Q9UJX3 599 aa19.16■□□□□ 0.66
HDAC4-203ENST00000445704 DNAH14Q0VDD8 3507 aa19.16■□□□□ 0.66
HDAC4-203ENST00000445704 LAMA1P25391 3075 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 CXorf51AA0A1B0GTR3 108 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 EEF2KO00418 725 aaKnown RBP19.15■□□□□ 0.66
HDAC4-203ENST00000445704 ARHGAP33O14559 1287 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 BCAT2O15382 392 aaPredicted RBP19.15■□□□□ 0.66
HDAC4-203ENST00000445704 FGF10O15520 208 aaPredicted RBP19.15■□□□□ 0.66
HDAC4-203ENST00000445704 KDELR3O43731 214 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 HTR7P34969 479 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 PCK1P35558 622 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 PPP2CBP62714 309 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 PPP2CAP67775 309 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 BNC1Q01954 994 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 TBX2Q13207 712 aaPredicted RBP19.15■□□□□ 0.66
HDAC4-203ENST00000445704 MAPK8IP2Q13387 824 aaPredicted RBP19.15■□□□□ 0.66
HDAC4-203ENST00000445704 SLC18A3Q16572 532 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 AGBL4Q5VU57 503 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 TXNRD3NBQ6F5E7 133 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 UMODL1-AS1Q8N2C9 162 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 PCDH20Q8N6Y1 951 aaKnown RBP19.15■□□□□ 0.66
HDAC4-203ENST00000445704 GRIN3AQ8TCU5 1115 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 CCDC114Q96M63 670 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 CHP1Q99653 195 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 TM6SF2Q9BZW4 377 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 EBF2Q9HAK2 575 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 FARP1Q9Y4F1 1045 aaPredicted RBP19.15■□□□□ 0.66
HDAC4-203ENST00000445704 WASF2Q9Y6W5 498 aa19.15■□□□□ 0.66
HDAC4-203ENST00000445704 PLXNA2O75051 1894 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 SSU72P8A0A1W2PR75 194 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 MED19A0JLT2 244 aaPredicted RBP19.14■□□□□ 0.65
HDAC4-203ENST00000445704 LRRC72A6NJI9 287 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 EIF3CLB5ME19 914 aaKnown RBP19.14■□□□□ 0.65
HDAC4-203ENST00000445704 RASA4BC9J798 803 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 RASA4O43374 803 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 CD27P26842 260 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 YBEYP58557 167 aaPredicted RBP19.14■□□□□ 0.65
HDAC4-203ENST00000445704 GRIK2Q13002 908 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 ACAP1Q15027 740 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 SMTNL2Q2TAL5 461 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 UAP1L1Q3KQV9 507 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 CARD16Q5EG05 197 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 PPP6R3Q5H9R7 873 aaPredicted RBP19.14■□□□□ 0.65
HDAC4-203ENST00000445704 KCNT1Q5JUK3 1230 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 CPNE8Q86YQ8 564 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 PSTKQ8IV42 348 aaKnown RBP19.14■□□□□ 0.65
HDAC4-203ENST00000445704 MINDY1Q8N5J2 469 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 NIPA2Q8N8Q9 360 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 NETO2Q8NC67 525 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 TMIEQ8NEW7 156 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 EIF3CQ99613 913 aaKnown RBP19.14■□□□□ 0.65
HDAC4-203ENST00000445704 RBSNQ9H1K0 784 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 LRRC19Q9H756 370 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 TM9SF3Q9HD45 589 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 IL36AQ9UHA7 158 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 HPCAL4Q9UM19 191 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 CACNA1AO00555 2505 aa19.14■□□□□ 0.65
HDAC4-203ENST00000445704 KPNA3O00505 521 aaPredicted RBP19.13■□□□□ 0.65
HDAC4-203ENST00000445704 SLC7A4O43246 635 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 PLRG1O43660 514 aaKnown RBP19.13■□□□□ 0.65
HDAC4-203ENST00000445704 LEFTY1O75610 366 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 PRNPP04156 253 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 TPM1P09493 284 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 RECQLP46063 649 aaPredicted RBP19.13■□□□□ 0.65
HDAC4-203ENST00000445704 DNA2P51530 1060 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 CCNHP51946 323 aaPredicted RBP19.13■□□□□ 0.65
HDAC4-203ENST00000445704 TAS2R38P59533 333 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 SERINC3Q13530 473 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 PIGHQ14442 188 aaPredicted RBP19.13■□□□□ 0.65
HDAC4-203ENST00000445704 PARP15Q460N3 678 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 ARSIQ5FYB1 569 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 PIP5KL1Q5T9C9 394 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 LAYNQ6UX15 382 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 RFX8Q6ZV50 586 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 ZNF354CQ86Y25 554 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 OR6K2Q8NGY2 324 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 VOPP1Q96AW1 172 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 ISG20Q96AZ6 181 aaKnown RBP19.13■□□□□ 0.65
HDAC4-203ENST00000445704 CELF6Q96J87 481 aaKnown RBP19.13■□□□□ 0.65
HDAC4-203ENST00000445704 NCAPGQ9BPX3 1015 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 TRIM5Q9C035 493 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 ZWILCHQ9H900 591 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 CWC15Q9P013 229 aaKnown RBP19.13■□□□□ 0.65
HDAC4-203ENST00000445704 IP6K2Q9UHH9 426 aa19.13■□□□□ 0.65
HDAC4-203ENST00000445704 A0A1B0GVT2 93 aa19.12■□□□□ 0.65
HDAC4-203ENST00000445704 A0A1W2PPC4 97 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms