RNA–Protein interactions for RNA: ENST00000445399.5

TGFA-206, Transcript of transforming growth factor alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFA, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-206ENST00000445399 HOXB2P14652 356 aa13.48□□□□□ -0.25
TGFA-206ENST00000445399 CLCN6P51797 869 aa13.48□□□□□ -0.25
TGFA-206ENST00000445399 GEMIN4P57678 1058 aaKnown RBP13.48□□□□□ -0.25
TGFA-206ENST00000445399 PPIDQ08752 370 aaKnown RBP13.48□□□□□ -0.25
TGFA-206ENST00000445399 SLC10A7Q0GE19 358 aa13.48□□□□□ -0.25
TGFA-206ENST00000445399 PDK1Q15118 436 aa13.48□□□□□ -0.25
TGFA-206ENST00000445399 NOMO1Q15155 1222 aa13.48□□□□□ -0.25
TGFA-206ENST00000445399 SIX1Q15475 284 aaPredicted RBP13.48□□□□□ -0.25
TGFA-206ENST00000445399 CCDC181Q5TID7 509 aa13.48□□□□□ -0.25
TGFA-206ENST00000445399 PAPD7Q5XG87 772 aaKnown RBP13.48□□□□□ -0.25
TGFA-206ENST00000445399 C22orf39Q6P5X5 142 aa13.48□□□□□ -0.25
TGFA-206ENST00000445399 SYT10Q6XYQ8 523 aa13.48□□□□□ -0.25
TGFA-206ENST00000445399 Q6ZVU0 165 aa13.48□□□□□ -0.25
TGFA-206ENST00000445399 BZW1Q7L1Q6 419 aaKnown RBP13.48□□□□□ -0.25
TGFA-206ENST00000445399 ADAT2Q7Z6V5 191 aaKnown RBP13.48□□□□□ -0.25
TGFA-206ENST00000445399 ZC3H18Q86VM9 953 aaKnown RBP13.48□□□□□ -0.25
TGFA-206ENST00000445399 RASGEF1CQ8N431 466 aa13.48□□□□□ -0.25
TGFA-206ENST00000445399 DTWD2Q8NBA8 298 aa13.48□□□□□ -0.25
TGFA-206ENST00000445399 ACTL9Q8TC94 416 aa13.48□□□□□ -0.25
TGFA-206ENST00000445399 ZNF419Q96HQ0 510 aaPredicted RBP13.48□□□□□ -0.25
TGFA-206ENST00000445399 NAPGQ99747 312 aaPredicted RBP13.48□□□□□ -0.25
TGFA-206ENST00000445399 IER2Q9BTL4 223 aa13.48□□□□□ -0.25
TGFA-206ENST00000445399 C1QTNF1Q9BXJ1 281 aa13.48□□□□□ -0.25
TGFA-206ENST00000445399 TNKS2Q9H2K2 1166 aa13.48□□□□□ -0.25
TGFA-206ENST00000445399 SPATA6Q9NWH7 488 aaPredicted RBP13.48□□□□□ -0.25
TGFA-206ENST00000445399 SUN2Q9UH99 717 aa13.48□□□□□ -0.25
TGFA-206ENST00000445399 NCOR1O75376 2440 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 EDDM13A0A1B0GTR0 161 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 CTAGE9A4FU28 777 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 PPP1R12AO14974 1030 aaPredicted RBP13.47□□□□□ -0.25
TGFA-206ENST00000445399 MUSKO15146 869 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 MATN3O15232 486 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 SYNCRIPO60506 623 aaKnown RBP13.47□□□□□ -0.25
TGFA-206ENST00000445399 FGGP02679 453 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 PRLRP16471 622 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 CXCL12P48061 93 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 COPAP53621 1224 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 AP1B1Q10567 949 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 CAMK2GQ13555 558 aaPredicted RBP13.47□□□□□ -0.25
TGFA-206ENST00000445399 RFTN1Q14699 578 aaPredicted RBP13.47□□□□□ -0.25
TGFA-206ENST00000445399 LBRQ14739 615 aaKnown RBP13.47□□□□□ -0.25
TGFA-206ENST00000445399 PRKD1Q15139 912 aaPredicted RBP13.47□□□□□ -0.25
TGFA-206ENST00000445399 CCDC13Q8IYE1 715 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 MAML2Q8IZL2 1156 aaPredicted RBP13.47□□□□□ -0.25
TGFA-206ENST00000445399 STK40Q8N2I9 435 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 TEX26Q8N6G2 289 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 TSEN2Q8NCE0 465 aaKnown RBP13.47□□□□□ -0.25
TGFA-206ENST00000445399 OR2A12Q8NGT7 310 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 CASKIN2Q8WXE0 1202 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 MAML1Q92585 1016 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 FATE1Q969F0 183 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 ISG20Q96AZ6 181 aaKnown RBP13.47□□□□□ -0.25
TGFA-206ENST00000445399 C16orf45Q96MC5 204 aaPredicted RBP13.47□□□□□ -0.25
TGFA-206ENST00000445399 ZNF599Q96NL3 588 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 FAM129BQ96TA1 746 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 LRFN3Q9BTN0 628 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 CEP44Q9C0F1 390 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 BRD8Q9H0E9 1235 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 C10orf88Q9H8K7 445 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 SMARCAL1Q9NZC9 954 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 LHX3Q9UBR4 397 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 SLC8A2Q9UPR5 921 aa13.47□□□□□ -0.25
TGFA-206ENST00000445399 TARSL2A2RTX5 802 aaKnown RBP13.46□□□□□ -0.25
TGFA-206ENST00000445399 K7ESF4 209 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 KCNK1O00180 336 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 CES2O00748 559 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 BNIP3LO60238 219 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 PAPSS2O95340 614 aaPredicted RBP13.46□□□□□ -0.25
TGFA-206ENST00000445399 CCNB1P14635 433 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 TCP1P17987 556 aaKnown RBP13.46□□□□□ -0.25
TGFA-206ENST00000445399 CASQ1P31415 396 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 DEKP35659 375 aaKnown RBP13.46□□□□□ -0.25
TGFA-206ENST00000445399 RGRP47804 291 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 CCR3P51677 355 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 DGKEP52429 567 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 EIF3EP60228 445 aaKnown RBP13.46□□□□□ -0.25
TGFA-206ENST00000445399 ZNF33AQ06730 810 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 XRCC4Q13426 336 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 HNRNPDQ14103 355 aaKnown RBP13.46□□□□□ -0.25
TGFA-206ENST00000445399 LONRF2Q1L5Z9 754 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 CARD16Q5EG05 197 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 ATXN7L2Q5T6C5 722 aaPredicted RBP13.46□□□□□ -0.25
TGFA-206ENST00000445399 TMCO4Q5TGY1 634 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 MARC1Q5VT66 337 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 TIGD7Q6NT04 549 aaPredicted RBP13.46□□□□□ -0.25
TGFA-206ENST00000445399 DPY19L3Q6ZPD9 716 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 METTL3Q86U44 580 aaKnown RBP13.46□□□□□ -0.25
TGFA-206ENST00000445399 C1orf210Q8IVY1 113 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 PGBD5Q8N414 524 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 PCDH20Q8N6Y1 951 aaKnown RBP13.46□□□□□ -0.25
TGFA-206ENST00000445399 TTC13Q8NBP0 860 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 CHST14Q8NCH0 376 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 TFB1MQ8WVM0 346 aaKnown RBP13.46□□□□□ -0.25
TGFA-206ENST00000445399 VOPP1Q96AW1 172 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 HHIPQ96QV1 700 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 TM6SF2Q9BZW4 377 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 MKRN2Q9H000 416 aaKnown RBP13.46□□□□□ -0.25
TGFA-206ENST00000445399 SLC6A17Q9H1V8 727 aa13.46□□□□□ -0.25
TGFA-206ENST00000445399 TTC7AQ9ULT0 858 aaPredicted RBP13.46□□□□□ -0.25
TGFA-206ENST00000445399 BDP1A6H8Y1 2624 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms