RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 ADAP00813 363 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 URODP06132 367 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 CHRM4P08173 479 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 IFIT1P09914 478 aaKnown RBP4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 GALNT2Q10471 571 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 G3BP1Q13283 466 aaKnown RBP eCLIP4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 C6orf10Q5SRN2 563 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 ADGRG6Q86SQ4 1221 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 MON1AQ86VX9 555 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 SLC25A41Q8N5S1 370 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 NANOGP1Q8N7R0 232 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 NAXEQ8NCW5 288 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 ZNF548Q8NEK5 533 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 ZNF419Q96HQ0 510 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 APOPT1Q96IL0 206 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 EYA3Q99504 573 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 LBHD1Q9BQE6 289 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 TMEM79Q9BSE2 394 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 TRMOQ9BU70 441 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 PAIP1Q9H074 479 aaKnown RBP4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 EPHX3Q9H6B9 360 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 MAP6D1Q9H9H5 199 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 PNRC2Q9NPJ4 139 aaKnown RBP4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 SEMA4BQ9NPR2 832 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 ALKBH4Q9NXW9 302 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 GRHL1Q9NZI5 618 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 SLC25A10Q9UBX3 287 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 PLEKHB1Q9UF11 243 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 CNOT7Q9UIV1 285 aaKnown RBP4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 CDH22Q9UJ99 828 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 DHDHQ9UQ10 334 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 SOGA1O94964 1423 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 NCAPD3P42695 1498 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 LY6G6EA0A0G2JKS1 128 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 CCDC196A0A1B0GTZ2 297 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 TEX22C9J3V5 150 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 HBP1O60381 514 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 MOSPD3O75425 235 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 TMCC1O94876 653 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 EPN2O95208 641 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 SERPINC1P01008 464 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 ATP1A3P13637 1013 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 TNFRSF1BP20333 461 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 TNFSF8P32971 234 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 SKIV2L2P42285 1042 aaKnown RBP4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 ZNF81P51508 661 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 CDH15P55291 814 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 TBX2Q13207 712 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 INPP5JQ15735 1006 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 PRICKLE4Q2TBC4 344 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 ALG10Q5BKT4 473 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 ZNF766Q5HY98 468 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 ALG10BQ5I7T1 473 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 PXDC1Q5TGL8 231 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 C17orf99Q6UX52 265 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 C1QL2Q7Z5L3 287 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 IGFN1Q86VF2 1251 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 WDR5BQ86VZ2 330 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 TSPYL6Q8N831 410 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 ZNF366Q8N895 744 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 TBC1D22AQ8WUA7 517 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 TMEM174Q8WUU8 243 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 HSPH1Q92598 858 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 CNOT9Q92600 299 aaKnown RBP4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 RNF125Q96EQ8 232 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 SEC62Q99442 399 aaKnown RBP4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 IFT27Q9BW83 186 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 C1QTNF7Q9BXJ2 289 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 SLC32A1Q9H598 525 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 RNF146Q9NTX7 359 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 FBXO40Q9UH90 709 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 CYP46A1Q9Y6A2 500 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 TOP2BQ02880 1626 aa4.85□□□□□ -1.63
HMGB3P6-201ENST00000444896 BIVM-ERCC5R4GMW8 1640 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 C17orf113A0A1B0GUU1 675 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 DDTLA6NHG4 134 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 FAM157AC9JC47 383 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 PPEF2O14830 753 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 GUCY1B2O75343 617 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 NDUFB8O95169 186 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 UNGP13051 313 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 GGT5P36269 586 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 GPD2P43304 727 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 CCT4P50991 539 aaKnown RBP4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 GAD2Q05329 585 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 ME3Q16798 604 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 NUGGCQ68CJ6 796 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 ZNF425Q6IV72 752 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 SLC22A25Q6T423 547 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 ARFGAP1Q8N6T3 406 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 PLD5Q8N7P1 536 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 OR4N2Q8NGD1 307 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 MPLKIPQ8TAP9 179 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 CENPIQ92674 756 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 INTS2Q9H0H0 1204 aaKnown RBP4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 ZBTB40Q9NUA8 1239 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 ZNF69Q9UC07 566 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 CNPY2Q9Y2B0 182 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 TMEM98Q9Y2Y6 226 aa4.84□□□□□ -1.63
HMGB3P6-201ENST00000444896 HS3ST3B1Q9Y662 390 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms