RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 NQO1P15559 274 aaKnown RBP10.76□□□□□ -0.69
CALD1-210ENST00000443197 TSPAN8P19075 237 aa10.76□□□□□ -0.69
CALD1-210ENST00000443197 FOXN2P32314 431 aa10.76□□□□□ -0.69
CALD1-210ENST00000443197 GRAMD1BQ3KR37 738 aa10.76□□□□□ -0.69
CALD1-210ENST00000443197 AGAP9Q5VTM2 703 aa10.76□□□□□ -0.69
CALD1-210ENST00000443197 KATNBL1Q9H079 304 aa10.76□□□□□ -0.69
CALD1-210ENST00000443197 MAN1C1Q9NR34 630 aa10.76□□□□□ -0.69
CALD1-210ENST00000443197 NOP53Q9NZM5 478 aaKnown RBP10.76□□□□□ -0.69
CALD1-210ENST00000443197 CD274Q9NZQ7 290 aa10.76□□□□□ -0.69
CALD1-210ENST00000443197 CHKBQ9Y259 395 aa10.76□□□□□ -0.69
CALD1-210ENST00000443197 VAV1P15498 845 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 ABL2P42684 1182 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 SLC11A1P49279 550 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 RBBP5Q15291 538 aaKnown RBP10.75□□□□□ -0.69
CALD1-210ENST00000443197 DLG2Q15700 870 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 ZBTB6Q15916 424 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 DBN1Q16643 649 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 SLC9A4Q6AI14 798 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 RGS9BPQ6ZS82 235 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 MFN1Q8IWA4 741 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 KCTD4Q8WVF5 259 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 KCTD13Q8WZ19 329 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 HDAC10Q969S8 669 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 BTN2A3PQ96KV6 586 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 FAM96AQ9H5X1 160 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 SNX15Q9NRS6 342 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 RGS18Q9NS28 235 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 CRLS1Q9UJA2 301 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 TRIM16O95361 564 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 TOP3BO95985 862 aaKnown RBP10.75□□□□□ -0.69
CALD1-210ENST00000443197 TYMPP19971 482 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 TPSB2P20231 275 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 NMBRP28336 390 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 MAP2K2P36507 400 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 FOXD4Q12950 439 aaPredicted RBP10.75□□□□□ -0.69
CALD1-210ENST00000443197 TPSAB1Q15661 275 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 RHBDF2Q6PJF5 856 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 ARHGAP36Q6ZRI8 547 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 GLT6D1Q7Z4J2 308 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 HS6ST3Q8IZP7 471 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 HMCESQ96FZ2 354 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 LRGUKQ96M69 825 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 SLC9A7Q96T83 725 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 IL1RL2Q9HB29 575 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 USP29Q9HBJ7 922 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 HAS3O00219 553 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 TRIM13O60858 407 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 TBL1XO60907 577 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 GABRR2P28476 465 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 KCNQ1P51787 676 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 ZNF135P52742 658 aaPredicted RBP10.75□□□□□ -0.69
CALD1-210ENST00000443197 RPS24P62847 133 aaKnown RBP10.75□□□□□ -0.69
CALD1-210ENST00000443197 KCNJ2P63252 427 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 MPP2Q14168 576 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 SGO1Q5FBB7 561 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 ESRP1Q6NXG1 681 aaKnown RBP10.75□□□□□ -0.69
CALD1-210ENST00000443197 CACUL1Q86Y37 369 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 TTC9BQ8N6N2 239 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 FAM167BQ9BTA0 163 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.75□□□□□ -0.692e-6■■■□□ 14.6
CALD1-210ENST00000443197 HCSTQ9UBK5 93 aa10.75□□□□□ -0.69
CALD1-210ENST00000443197 AP2A1O95782 977 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 PSEN1P49768 467 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 AIF1P55008 147 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 RBM23Q86U06 439 aaKnown RBP10.74□□□□□ -0.69
CALD1-210ENST00000443197 IRGQQ8WZA9 623 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 CYP2S1Q96SQ9 504 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 NUF2Q9BZD4 464 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 THAP1Q9NVV9 213 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 ZNF358Q9NW07 568 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 SEPT3Q9UH03 358 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 FBXO5Q9UKT4 447 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 CRTAMO95727 393 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 C2P06681 752 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 CORO1AP31146 461 aaKnown RBP10.74□□□□□ -0.69
CALD1-210ENST00000443197 FMO4P31512 558 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 KCNJ11Q14654 390 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 POM121L1PQ3SYA9 428 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 IFNEQ86WN2 208 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 HERC6Q8IVU3 1022 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 AGGF1Q8N302 714 aaeCLIP10.74□□□□□ -0.697e-7■■■□□ 15.8
CALD1-210ENST00000443197 TDRD5Q8NAT2 981 aaKnown RBP10.74□□□□□ -0.69
CALD1-210ENST00000443197 RFWD2Q8NHY2 731 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 NOD2Q9HC29 1040 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 ENPP3O14638 875 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 EDF1O60869 148 aaKnown RBP10.74□□□□□ -0.69
CALD1-210ENST00000443197 SERPINE1P05121 402 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 PYGLP06737 847 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 HADHAP40939 763 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 TPD52P55327 224 aaPredicted RBP10.74□□□□□ -0.69
CALD1-210ENST00000443197 PLIN5Q00G26 463 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 ARHGEF7Q14155 803 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 C10orf107Q8IVU9 208 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 DENND6AQ8IWF6 608 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 TEKT5Q96M29 485 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 OSBPL7Q9BZF2 842 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 ZMYND8Q9ULU4 1186 aaPredicted RBP10.74□□□□□ -0.69
CALD1-210ENST00000443197 L3MBTL1Q9Y468 752 aa10.74□□□□□ -0.69
CALD1-210ENST00000443197 FARP1Q9Y4F1 1045 aaPredicted RBP10.74□□□□□ -0.69
CALD1-210ENST00000443197 SYN3O14994 580 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms