RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 PCDHGA1Q9Y5H4 931 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.02□□□□□ -1.61
PTPN4-206ENST00000441089 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.02□□□□□ -1.61
PTPN4-206ENST00000441089 OBSL1O75147 1896 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 NUMA1Q14980 2115 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 BSNQ9UPA5 3926 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 MAP1AP78559 2803 aaPredicted RBP5.01□□□□□ -1.61
PTPN4-206ENST00000441089 SDK2Q58EX2 2172 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 A0A1B0GTW7 788 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 SMIM28A0A1B0GU29 152 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 A0A1W2PQJ5 194 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 CLEC18AA5D8T8 446 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 OTOL1A6NHN0 477 aaPredicted RBP5.01□□□□□ -1.61
PTPN4-206ENST00000441089 LRRC53A6NM62 1247 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 SYN3O14994 580 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 SUV39H1O43463 412 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 BRINP1O60477 761 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 STX10O60499 249 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 CILPO75339 1184 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 ZNF217O75362 1048 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 PRAMEF12O95522 483 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 PTMAP06454 111 aaKnown RBP5.01□□□□□ -1.61
PTPN4-206ENST00000441089 C1SP09871 688 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 TMEM191BP0C7N4 346 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 SFTPCP11686 197 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 RAC2P15153 192 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 UCHL3P15374 230 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 KCNE1P15382 129 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 TRIM21P19474 475 aaKnown RBP5.01□□□□□ -1.61
PTPN4-206ENST00000441089 POU3F2P20265 443 aaPredicted RBP5.01□□□□□ -1.61
PTPN4-206ENST00000441089 KRT9P35527 623 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 PIK3CAP42336 1068 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 ALDH1A3P47895 512 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 JAM2P57087 298 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 POLR2FP61218 127 aaKnown RBP5.01□□□□□ -1.61
PTPN4-206ENST00000441089 ZBED6P86452 979 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 TFAMQ00059 246 aaKnown RBP5.01□□□□□ -1.61
PTPN4-206ENST00000441089 BIRC3Q13489 604 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 TRIM14Q14142 442 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 MTF1Q14872 753 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 TMEM132DQ14C87 1099 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 SURF1Q15526 300 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 NAB2Q15742 525 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 MEA1Q16626 185 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 KYAT1Q16773 422 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 EOGTQ5NDL2 527 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 STXBP5Q5T5C0 1151 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 WDR59Q6PJI9 974 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 CLEC18BQ6UXF7 455 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 RRAGAQ7L523 313 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 ERICH1Q86X53 443 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 MCATQ8IVS2 390 aaKnown RBP5.01□□□□□ -1.61
PTPN4-206ENST00000441089 CD302Q8IX05 232 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 FAM26EQ8N5C1 309 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 UBR7Q8N806 425 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 CLEC18CQ8NCF0 446 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 CCDC150Q8NCX0 1101 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 FBXL13Q8NEE6 735 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 NEK11Q8NG66 645 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 PIWIL2Q8TC59 973 aaKnown RBP5.01□□□□□ -1.61
PTPN4-206ENST00000441089 HMGB4Q8WW32 186 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 RHOVQ96L33 236 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 UROC1Q96N76 676 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 PPP1R10Q96QC0 940 aaKnown RBP5.01□□□□□ -1.61
PTPN4-206ENST00000441089 DNAJC7Q99615 494 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 CHP1Q99653 195 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 NUP58Q9BVL2 599 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 LRRC3Q9BY71 257 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 TASP1Q9H6P5 420 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 GAREM1Q9H706 876 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 PLEKHA5Q9HAU0 1116 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 ABHD10Q9NUJ1 306 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 RAB20Q9NX57 234 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 FBXL5Q9UKA1 691 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 DNAJC12Q9UKB3 198 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 TLR6Q9Y2C9 796 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 C2CD2Q9Y426 696 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 NUB1Q9Y5A7 615 aa5.01□□□□□ -1.61
PTPN4-206ENST00000441089 SPENQ96T58 3664 aaKnown RBP5.01□□□□□ -1.61
PTPN4-206ENST00000441089 CSMD1Q96PZ7 3565 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 ANO9A1A5B4 782 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 BLACEA4D250 179 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 GOLGA6L6A8MZA4 724 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 F8VZ95 297 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 FOXN3O00409 490 aaPredicted RBP5□□□□□ -1.61
PTPN4-206ENST00000441089 BPNT1O95861 308 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 ASS1P00966 412 aaKnown RBP5□□□□□ -1.61
PTPN4-206ENST00000441089 CALCAP01258 141 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 TNNC2P02585 160 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 ITGB3P05106 788 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 PLEKP08567 350 aaPredicted RBP5□□□□□ -1.61
PTPN4-206ENST00000441089 SKILP12757 684 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 ACO1P21399 889 aaKnown RBP5□□□□□ -1.61
PTPN4-206ENST00000441089 GABRR2P28476 465 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 CDC25CP30307 473 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 LRPAP1P30533 357 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 POLR2BP30876 1174 aaKnown RBP5□□□□□ -1.61
PTPN4-206ENST00000441089 HNRNPH3P31942 346 aaKnown RBP5□□□□□ -1.61
PTPN4-206ENST00000441089 AVPR1AP37288 418 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 AP3M2P53677 418 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms