RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ITPRIPL1Q6GPH6 555 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 ZNF354CQ86Y25 554 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 FBXO27Q8NI29 283 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 CDKL2Q92772 493 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 TTC17Q96AE7 1141 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 HAPLN3Q96S86 360 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 BRD8Q9H0E9 1235 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 VPS11Q9H270 941 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 VCX3BQ9H321 246 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 ELAC1Q9H777 363 aaKnown RBP14.41□□□□□ -0.1
LIMD1-202ENST00000440097 VCX3AQ9NNX9 186 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 EIF2B3Q9NR50 452 aaKnown RBP14.41□□□□□ -0.1
LIMD1-202ENST00000440097 ARHGEF38Q9NXL2 777 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 IGSF9Q9P2J2 1179 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 TXNDC16Q9P2K2 825 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 RPS6KL1Q9Y6S9 549 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 PDE4DIPQ5VU43 2346 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 COPEO14579 308 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 ATP9BO43861 1147 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 IGLV3-25P01717 112 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 ETS2P15036 469 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 TEX44Q53QW1 395 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 ARHGAP36Q6ZRI8 547 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 TMEM173Q86WV6 379 aaPredicted RBP14.4□□□□□ -0.1
LIMD1-202ENST00000440097 ARHGAP24Q8N264 748 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 BANPQ8N9N5 519 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 NCSTNQ92542 709 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 FAM111AQ96PZ2 611 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 ECSITQ9BQ95 431 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 LMCD1Q9NZU5 365 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 SLC17A6Q9P2U8 582 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 VANGL2Q9ULK5 521 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 SCML2Q9UQR0 700 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 FRMPD3Q5JV73 1810 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 B2RBV5 119 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 PITPNM1O00562 1244 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 DLDP09622 509 aaKnown RBP14.4□□□□□ -0.1
LIMD1-202ENST00000440097 YWHAQP27348 245 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 RAP1GDS1P52306 607 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 COG7P83436 770 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 DUSP4Q13115 394 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 LIN52Q52LA3 116 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 RTP2Q5QGT7 225 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 BEND5Q7L4P6 421 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 TFAP2DQ7Z6R9 452 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 NPAS4Q8IUM7 802 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.4□□□□□ -0.1
LIMD1-202ENST00000440097 OXNAD1Q96HP4 312 aaPredicted RBP14.4□□□□□ -0.1
LIMD1-202ENST00000440097 NMUR2Q9GZQ4 415 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 BFARQ9NZS9 450 aa14.4□□□□□ -0.1
LIMD1-202ENST00000440097 OR6C75A6NL08 312 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 E9PAM4 449 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 TM9SF1O15321 606 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 POLBP06746 335 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 MYL2P10916 166 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 PGAM1P18669 254 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 TBX4P57082 545 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 PRPSAP1Q14558 356 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 C10orf120Q5SQS8 335 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 PRSS55Q6UWB4 352 aaPredicted RBP14.39□□□□□ -0.11
LIMD1-202ENST00000440097 ALYREFQ86V81 257 aaKnown RBP14.39□□□□□ -0.11
LIMD1-202ENST00000440097 GIPC2Q8TF65 315 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 CLPTM1LQ96KA5 538 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 C8orf48Q96LL4 319 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 GBA3Q9H227 469 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 TRHDEQ9UKU6 1024 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 HS3ST4Q9Y661 456 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 PTPRDP23468 1912 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 NLRC5Q86WI3 1866 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 CCDC78A2IDD5 438 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 HOXA2O43364 376 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 USP1O94782 785 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 AP2A1O95782 977 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 BAG2O95816 211 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 ALDH7A1P49419 539 aaKnown RBP14.39□□□□□ -0.11
LIMD1-202ENST00000440097 TAF10Q12962 218 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 PPP2R5DQ14738 602 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 TCTN1Q2MV58 587 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 RNF19BQ6ZMZ0 732 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 RIPOR1Q6ZS17 1223 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 APOPT1Q96IL0 206 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 TTC1Q99614 292 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 CENPKQ9BS16 269 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 BEGAINQ9BUH8 593 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 NDFIP2Q9NV92 336 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 MARCH5Q9NX47 278 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 C5orf42Q9H799 3197 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 XIRP2A4UGR9 3374 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 FGF10O15520 208 aaPredicted RBP14.39□□□□□ -0.11
LIMD1-202ENST00000440097 ZNF189O75820 626 aaPredicted RBP14.39□□□□□ -0.11
LIMD1-202ENST00000440097 ENO1P06733 434 aaKnown RBP14.39□□□□□ -0.11
LIMD1-202ENST00000440097 TPH1P17752 444 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 BGNP21810 368 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 NUMBP49757 651 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 PSMD5Q16401 504 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 SPOUT1Q5T280 376 aaKnown RBP14.39□□□□□ -0.11
LIMD1-202ENST00000440097 OTOP3Q7RTS5 596 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 APBB2Q92870 758 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 PANX3Q96QZ0 392 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 VAT1Q99536 393 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms