RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 MDM1Q8TC05 714 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 RNF139Q8WU17 664 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 STON2Q8WXE9 905 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 HHIPQ96QV1 700 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 CYTH2Q99418 400 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 TRABDQ9H4I3 376 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 SAYSD1Q9NPB0 183 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 TMPRSS4Q9NRS4 437 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 EPS15L1Q9UBC2 864 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 LNPEPQ9UIQ6 1025 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ZFHX4Q86UP3 3567 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 KNTC1P50748 2209 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 KANSL1LA0AUZ9 987 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 LRRD1A4D1F6 860 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 C2CD4BA6NLJ0 364 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 TCP11X1B4DZS4 312 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 SPECC1L-ADORA2AF8WAN1 911 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 EDF1O60869 148 aaKnown RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 DNAJC6O75061 913 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 LMNAP02545 664 aaKnown RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 EZRP15311 586 aaKnown RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 PECAM1P16284 738 aaPredicted RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 CCND1P24385 295 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 GCAP28676 217 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 SERPINB9P50453 376 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ATXN1P54253 815 aaKnown RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 RPL7AP62424 266 aaKnown RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ATP11AP98196 1134 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 OGDHQ02218 1023 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 SLC18A2Q05940 514 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 RUNX3Q13761 415 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ANGPT1Q15389 498 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 TBCCQ15814 346 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 POM121L1PQ3SYA9 428 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 PKDCCQ504Y2 493 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 DCAF6Q58WW2 860 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 FYB2Q5VWT5 728 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ANO7Q6IWH7 933 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ZNF852Q6ZMS4 543 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ARMCX6Q7L4S7 300 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 TMEM110Q86TL2 294 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 CIR1Q86X95 450 aaPredicted RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 APLFQ8IW19 511 aaPredicted RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 CELF5Q8N6W0 485 aaKnown RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 EMC1Q8N766 993 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 FRMD1Q8N878 549 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 DDI1Q8WTU0 396 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ATG4AQ8WYN0 398 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 FUBP3Q96I24 572 aaKnown RBP eCLIP4.86□□□□□ -1.631e-6■■■■■ 32.9
EDEM3-203ENST00000439962 ELAC2Q9BQ52 826 aaKnown RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 BBS2Q9BXC9 721 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 SLC4A5Q9BY07 1137 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 DUSP16Q9BY84 665 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 CIPCQ9C0C6 399 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 SLC6A17Q9H1V8 727 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 SMOC1Q9H4F8 434 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 FAM96AQ9H5X1 160 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 STN1Q9H668 368 aaKnown RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 LRRC4CQ9HCJ2 640 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 EIF2B3Q9NR50 452 aaKnown RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 TLR8Q9NR97 1041 aaKnown RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 THG1LQ9NWX6 298 aaKnown RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 UXTQ9UBK9 157 aaPredicted RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 CYTH4Q9UIA0 394 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 XPO7Q9UIA9 1087 aaKnown RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 RABGEF1Q9UJ41 708 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 SGK1O00141 431 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 GPR37L1O60883 481 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 UNC5CO95185 931 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ZBED1O96006 694 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 EGFP01133 1207 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 DHRS4L1P0CG22 281 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 NQO1P15559 274 aaKnown RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 CTHP32929 405 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ATP5C1P36542 298 aaKnown RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 GALK1P51570 392 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ELF3P78545 371 aaPredicted RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 OTUD4Q01804 1114 aaKnown RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 DMWDQ09019 674 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ILF2Q12905 390 aaKnown RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 KCNJ11Q14654 390 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 DAB2IPQ5VWQ8 1189 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 SYPL2Q5VXT5 272 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 BSPRYQ5W0U4 402 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 NUGGCQ68CJ6 796 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ASTLQ6HA08 431 aaPredicted RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 FAM43BQ6ZT52 329 aaPredicted RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 LIMS2Q7Z4I7 341 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 MON1AQ86VX9 555 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 CPNE8Q86YQ8 564 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 UBALD2Q8IYN6 164 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 FAM160A2Q8N612 972 aaPredicted RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 RPLP0P6Q8NHW5 317 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ACTL9Q8TC94 416 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 LRRC8CQ8TDW0 803 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ACMSDQ8TDX5 336 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 PYROXD1Q8WU10 500 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 MZB1Q8WU39 189 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 CPT1BQ92523 772 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 CENPIQ92674 756 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms