RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 NDST2P52849 883 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 INSCQ1MX18 579 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 C7orf31Q8N865 590 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 VPS50Q96JG6 964 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 TARS2Q9BW92 718 aaKnown RBP8.71□□□□□ -1.02
HPS4-206ENST00000439453 SLC4A5Q9BY07 1137 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 ASNSD1Q9NWL6 643 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 SEPT9Q9UHD8 586 aaPredicted RBP8.71□□□□□ -1.02
HPS4-206ENST00000439453 NRCAMQ92823 1304 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 COL4A4P53420 1690 aaPredicted RBP8.71□□□□□ -1.02
HPS4-206ENST00000439453 PITPNM1O00562 1244 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 METTL18O95568 372 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 PSAPP07602 524 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 ENO3P13929 434 aaPredicted RBP8.71□□□□□ -1.02
HPS4-206ENST00000439453 PTPN1P18031 435 aaKnown RBP8.71□□□□□ -1.02
HPS4-206ENST00000439453 GRIA1P42261 906 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 PRKCEQ02156 737 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 GSTM4Q03013 218 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 BTG3Q14201 252 aaPredicted RBP8.71□□□□□ -1.02
HPS4-206ENST00000439453 ANKDD1AQ495B1 522 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 ITPRIPL1Q6GPH6 555 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 GRAMD4Q6IC98 578 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 CYS1Q717R9 158 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 CARM1Q86X55 608 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 PGAM4Q8N0Y7 254 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 RP9Q8TA86 221 aaKnown RBP8.71□□□□□ -1.02
HPS4-206ENST00000439453 RCN3Q96D15 328 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 SCLYQ96I15 445 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 COX4I2Q96KJ9 171 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 LHX5Q9H2C1 402 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 HIPK3Q9H422 1215 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 COQ10BQ9H8M1 238 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 PRDM5Q9NQX1 630 aaPredicted RBP8.71□□□□□ -1.02
HPS4-206ENST00000439453 IGSF9Q9P2J2 1179 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 COL1A2P08123 1366 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 GOLGA8QA0A0J9YX86 632 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 GOLGA8OA6NCC3 632 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 GOLGA8NF8WBI6 632 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 H0YJX3 145 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 APOL1O14791 398 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 NBNO60934 754 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 PIGRP01833 764 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 GMPRP36959 345 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 SLC26A2P50443 739 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 BCAR1P56945 870 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 TUBA4AP68366 448 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 PFKPQ01813 784 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 RELAQ04206 551 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 NIPAL4Q0D2K0 466 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 DPYSQ14117 519 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 PDCD4Q53EL6 469 aaKnown RBP8.7□□□□□ -1.02
HPS4-206ENST00000439453 RAB6CQ53S08 254 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 FAM26DQ5JW98 314 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 C9orf50Q5SZB4 431 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 SH3PXD2AQ5TCZ1 1133 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 CYP4V2Q6ZWL3 525 aaPredicted RBP8.7□□□□□ -1.02
HPS4-206ENST00000439453 ATP6V0A1Q93050 837 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 PGBD4Q96DM1 585 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 CNDP1Q96KN2 507 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 ZNF597Q96LX8 424 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 YIPF2Q9BWQ6 316 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 OSBPL11Q9BXB4 747 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 NIFKQ9BYG3 293 aaKnown RBP8.7□□□□□ -1.02
HPS4-206ENST00000439453 RAB6CQ9H0N0 254 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 NR2E3Q9Y5X4 410 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 E2F8A0AVK6 867 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 WDR27A2RRH5 827 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 ALDH1A2O94788 518 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 OATP04181 439 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 TFPTP0C1Z6 253 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 IQCF3P0C7M6 154 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 CSF2RAP15509 400 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 TPSB2P20231 275 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 TGM2P21980 687 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 DPP6P42658 865 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 ACADVLP49748 655 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 OXCT1P55809 520 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 TPSAB1Q15661 275 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 ZNF618Q5T7W0 954 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 STEAP4Q687X5 459 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 NAPRTQ6XQN6 538 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 TDRD5Q8NAT2 981 aaKnown RBP8.7□□□□□ -1.02
HPS4-206ENST00000439453 AGR3Q8TD06 166 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 CDKL2Q92772 493 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 RMND5BQ96G75 393 aaPredicted RBP8.7□□□□□ -1.02
HPS4-206ENST00000439453 SLX1AQ9BQ83 275 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 TMEM79Q9BSE2 394 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 MTMR12Q9C0I1 747 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 WDR41Q9HAD4 459 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 PNPLA3Q9NST1 481 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 OLAHQ9NV23 265 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 ZNF358Q9NW07 568 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 IGKV6-21A0A0C4DH24 114 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 STX16-NPEPL1H3BU86 382 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 K7ERI5 159 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 ACOT8O14734 319 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 SERPINB7O75635 380 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 CHRNA1P02708 482 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 TYK2P29597 1187 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 SPIDRQ14159 915 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms