RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 PIGNO95427 931 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 HMBSP08397 361 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 EDNRBP24530 442 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 ADSLP30566 484 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 PTK2BQ14289 1009 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 TEDDM1Q5T9Z0 273 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 SLC27A1Q6PCB7 646 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 MAVSQ7Z434 540 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 STRA8Q7Z7C7 330 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 IPMKQ8NFU5 416 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 OR9I1Q8NGQ6 314 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 EPS15L1Q9UBC2 864 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 TMCO1Q9UM00 188 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 TLL2Q9Y6L7 1015 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 LTBP1Q14766 1721 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 GREB1LQ9C091 1923 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 TCRBV5S1A1TA0A578 114 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 GOLGA8CPA6NN73 597 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 B3GAT3O94766 335 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 KLHL2O95198 593 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 GNAO1P09471 354 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 TMED10P49755 219 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 TAF6P49848 677 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 PDK2Q15119 407 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 SDHAF4Q5VUM1 108 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 TTC33Q6PID6 262 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 PATL1Q86TB9 770 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 CAND1Q86VP6 1230 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 PHF21BQ96EK2 531 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 P2RY11Q96G91 374 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 BCO2Q9BYV7 579 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 NAA50Q9GZZ1 169 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 AP5M1Q9H0R1 490 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 ADNPQ9H2P0 1102 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 WDR41Q9HAD4 459 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 SYBUQ9NX95 663 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 DDX43Q9NXZ2 648 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 DTLQ9NZJ0 730 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 FOCADQ5VW36 1801 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 SLC15A5A6NIM6 579 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 ATICP31939 592 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 SLC26A2P50443 739 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 BST2Q10589 180 aaKnown RBP10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 POU6F1Q14863 301 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 CERCAMQ5T4B2 595 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 ARHGAP17Q68EM7 881 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 UGT2A3Q6UWM9 527 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 SLC7A5P1Q8MH63 180 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 LILRA2Q8N149 483 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 ACVR1CQ8NER5 493 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 ZNF398Q8TD17 642 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 MZB1Q8WU39 189 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 TMEM40Q8WWA1 233 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 MARCH7Q9H992 704 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 GBA2Q9HCG7 927 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 SDR42E2A6NKP2 422 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 F8W8V4 182 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 TNFAIP8O95379 198 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 SMIM10L2AP0DMW4 78 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 SMIM10L2BP0DMW5 78 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 IL4RP24394 825 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 PIK3R1P27986 724 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 TKTP29401 623 aaKnown RBP10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 CPOXP36551 454 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 BCAT1P54687 386 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 SOX4Q06945 474 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 CCL14Q16627 93 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 GNASQ5JWF2 1037 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 MAP3K21Q5TCX8 1036 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 C9orf57Q5W0N0 161 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 DRICH1Q6PGQ1 229 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 OLFML1Q6UWY5 402 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 NAPRTQ6XQN6 538 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 ZBTB49Q6ZSB9 765 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 HEATR4Q86WZ0 1026 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 UBR7Q8N806 425 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 KYQ8NBH2 561 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 RNF139Q8WU17 664 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 SEPHS2Q99611 448 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 IARS2Q9NSE4 1012 aaKnown RBP10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 TEX264Q9Y6I9 313 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 MCM3APO60318 1980 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 POLR2AP24928 1970 aaKnown RBP10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 ZNF831Q5JPB2 1677 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 M0QZ92 97 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 RNASEH2AO75792 299 aaKnown RBP10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 PFKMP08237 780 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 SMIM18P0DKX4 95 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 GJA5P36382 358 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 ESRRGP62508 458 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 AGKQ53H12 422 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 ZNF554Q86TJ5 538 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 NIPA2Q8N8Q9 360 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 MFSD3Q96ES6 412 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 FAM210AQ96ND0 272 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 POPDC2Q9HBU9 364 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 TRPC7Q9HCX4 862 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 SACM1LQ9NTJ5 587 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 BFARQ9NZS9 450 aa10.09□□□□□ -0.79
CDC42SE1-202ENST00000439374 BLOC1S6Q9UL45 172 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms