RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 WDR6Q9NNW5 1121 aaKnown RBP16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 ANLNQ9NQW6 1124 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 KLK14Q9P0G3 267 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 PRPF19Q9UMS4 504 aaKnown RBP16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 MAGEB16A2A368 324 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 MTSS1O43312 755 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 FKTNO75072 461 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 GNRH1P01148 92 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 FYNP06241 537 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 VCLP18206 1134 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 MPSTP25325 297 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 HCAR3P49019 387 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 NPY2RP49146 381 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 TPI1P60174 286 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 INTS6LQ5JSJ4 861 aaKnown RBP16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 CERCAMQ5T4B2 595 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 OGFRL1Q5TC84 451 aaPredicted RBP16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 ZYG11AQ6WRX3 759 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 CLEC20AQ6ZU45 233 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 SDCCAG8Q86SQ7 713 aaPredicted RBP16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 HIPK4Q8NE63 616 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 KLHDC9Q8NEP7 349 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 ACVR1CQ8NER5 493 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 PXYLP1Q8TE99 480 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 TMEM40Q8WWA1 233 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 NCSTNQ92542 709 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 HDAC11Q96DB2 347 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 BTBD9Q96Q07 612 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 CENPKQ9BS16 269 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 SPATA16Q9BXB7 569 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 ILKAPQ9H0C8 392 aaPredicted RBP16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 STK39Q9UEW8 545 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 ANKRD6Q9Y2G4 727 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 RAP2CQ9Y3L5 183 aa16.68■□□□□ 0.26
CLCNKA-203ENST00000439316 THSD7BQ9C0I4 1608 aa16.67■□□□□ 0.26
CLCNKA-203ENST00000439316 I6L893 689 aaPredicted RBP16.67■□□□□ 0.26
CLCNKA-203ENST00000439316 SLC22A2O15244 555 aa16.67■□□□□ 0.26
CLCNKA-203ENST00000439316 THRAP10827 490 aa16.67■□□□□ 0.26
CLCNKA-203ENST00000439316 HADHAP40939 763 aa16.67■□□□□ 0.26
CLCNKA-203ENST00000439316 DLG1Q12959 904 aa16.67■□□□□ 0.26
CLCNKA-203ENST00000439316 ZBTB17Q13105 803 aa16.67■□□□□ 0.26
CLCNKA-203ENST00000439316 RBBP5Q15291 538 aaKnown RBP16.67■□□□□ 0.26
CLCNKA-203ENST00000439316 CNPY1Q3B7I2 92 aa16.67■□□□□ 0.26
CLCNKA-203ENST00000439316 ITPRIPL1Q6GPH6 555 aa16.67■□□□□ 0.26
CLCNKA-203ENST00000439316 GDF6Q6KF10 455 aaPredicted RBP16.67■□□□□ 0.26
CLCNKA-203ENST00000439316 GPR22Q99680 433 aa16.67■□□□□ 0.26
CLCNKA-203ENST00000439316 C1QTNF1Q9BXJ1 281 aa16.67■□□□□ 0.26
CLCNKA-203ENST00000439316 ACE2Q9BYF1 805 aaPredicted RBP16.67■□□□□ 0.26
CLCNKA-203ENST00000439316 DRC3Q9H069 523 aa16.67■□□□□ 0.26
CLCNKA-203ENST00000439316 C20orf96Q9NUD7 363 aaPredicted RBP16.67■□□□□ 0.26
CLCNKA-203ENST00000439316 TRHDEQ9UKU6 1024 aa16.67■□□□□ 0.26
CLCNKA-203ENST00000439316 C9IYK1 514 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 NRP1O14786 923 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 HDAC3O15379 428 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 ATP9BO43861 1147 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 AMHP03971 560 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 CHRNGP07510 517 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 PTPN1P18031 435 aaKnown RBP16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 NFKB1P19838 968 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 AXLP30530 894 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 RAB27AP51159 221 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 TKTL1P51854 596 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 PRKAA2P54646 552 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 LILRA4P59901 499 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 GALNT2Q10471 571 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 ITGA7Q13683 1181 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 SNX17Q15036 470 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 ANO4Q32M45 955 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 LIPMQ5VYY2 423 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 CCSAPQ6IQ19 270 aaPredicted RBP16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 TMEM151AQ8N4L1 468 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 CPSF7Q8N684 471 aaKnown RBP16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 AGR3Q8TD06 166 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 IL22Q9GZX6 179 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 ZNF385DQ9H6B1 395 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 IARS2Q9NSE4 1012 aaKnown RBP16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 PSMD13Q9UNM6 376 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 SBK3P0C264 359 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 CD1EP15812 388 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 SERPINB5P36952 375 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 NUDT2P50583 147 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 GRM3Q14832 879 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 AP1ARQ63HQ0 302 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 SEL1L3Q68CR1 1132 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 TAF2Q6P1X5 1199 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 C16orf89Q6UX73 402 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 SNX32Q86XE0 403 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 PQLC1Q8N2U9 271 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 RNF39Q9H2S5 420 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 CHRAC1Q9NRG0 131 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 C6orf203Q9P0P8 240 aaPredicted RBP16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 CPSF2Q9P2I0 782 aaKnown RBP16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 VPS28Q9UK41 221 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 FBXW11Q9UKB1 542 aa16.66■□□□□ 0.26
CLCNKA-203ENST00000439316 GOLGA8QA0A0J9YX86 632 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 RGSL1A5PLK6 1076 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 GOLGA8OA6NCC3 632 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 GOLGA8NF8WBI6 632 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 TK2O00142 265 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 GRID2O43424 1007 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms