RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PLGP00747 810 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 RB1P06400 928 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 POLR2MP0CAP2 368 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 GHRP10912 638 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 ACTN1P12814 892 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 SELLP14151 372 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 GSPT1P15170 499 aaKnown RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 CDH3P22223 829 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 JAK1P23458 1154 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 DNAJB1P25685 340 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 NFKBIAP25963 317 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 ICAM3P32942 547 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 MAGEA4P43358 317 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 RBM5P52756 815 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 RABGGTBP53611 331 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 ADARP55265 1226 aaKnown RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 FAM189BP81408 668 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 GABPB1Q06547 395 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 ELP6Q0PNE2 266 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 NPRL3Q12980 569 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 PTK6Q13882 451 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 TUBB2AQ13885 445 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 MED22Q15528 200 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 MAPKAPK3Q16644 382 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 MAN2A1Q16706 1144 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 PROSER3Q2NL68 480 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 TRIM71Q2Q1W2 868 aaKnown RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 C15orf59Q2T9L4 293 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 MYLK3Q32MK0 819 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 KHDC1Q4VXA5 237 aaKnown RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 KHDC1LQ5JSQ8 128 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 TTC22Q5TAA0 569 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 METTL11BQ5VVY1 283 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 SHEQ5VZ18 495 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 NAA35Q5VZE5 725 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 AP1ARQ63HQ0 302 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 CENPPQ6IPU0 288 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 CRELD2Q6UXH1 353 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 LRIG3Q6UXM1 1119 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 LRRC55Q6ZSA7 311 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 SYT13Q7L8C5 426 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 RD3Q7Z3Z2 195 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 BNIPLQ7Z465 357 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 FAM83AQ86UY5 434 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 DNAAF5Q86Y56 855 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 LRRC49Q8IUZ0 686 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 RHOT2Q8IXI1 618 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 ADGRF2Q8IZF7 708 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 AADATQ8N5Z0 425 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 LINC00469Q8N7U9 141 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 DCBLD1Q8N8Z6 715 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 SLC4A11Q8NBS3 891 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 CCDC150Q8NCX0 1101 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 BBOF1Q8ND07 529 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 BEND2Q8NDZ0 799 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 METTL21AQ8WXB1 218 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 WASF1Q92558 559 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 PRCCQ92733 491 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 STAMQ92783 540 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 RAB24Q969Q5 203 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 GFM2Q969S9 779 aaKnown RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 SPACA9Q96E40 222 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 NRBF2Q96F24 287 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 C8orf76Q96K31 380 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 CLPTM1LQ96KA5 538 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 CNOT6LQ96LI5 555 aaKnown RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 ADAD1Q96M93 576 aaKnown RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 VRK1Q99986 396 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 FAM118BQ9BPY3 351 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 ERP44Q9BS26 406 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 SYT17Q9BSW7 474 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 TUBB2BQ9BVA1 445 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 HERC2P3Q9BVR0 1158 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 CCDC106Q9BWC9 280 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 TEX13AQ9BXU3 409 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 NYXQ9GZU5 481 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 IQCGQ9H095 443 aaKnown RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 CHST8Q9H2A9 424 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 SMARCAD1Q9H4L7 1026 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 SARS2Q9NP81 518 aaKnown RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 HPS4Q9NQG7 708 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 CNNM1Q9NRU3 951 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 UBAP1Q9NZ09 502 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 ZNF212Q9UDV6 495 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 TRPS1Q9UHF7 1281 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 TSPYL4Q9UJ04 414 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 AGO2Q9UKV8 859 aaKnown RBP3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 TNFSF13BQ9Y275 285 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 PCDHA1Q9Y5I3 950 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 CLCA3PQ9Y6N3 262 aa3.77□□□□□ -1.81
HMGB1P12-201ENST00000438594 GOLGA6L10A0A0M3HER8 536 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 GOLGA6L7A0A1B0GV03 622 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 EME2A4GXA9 379 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 FAM90A18PA6NE21 464 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 FAM90A16PA6NEW6 464 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 OR6C76A6NM76 312 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 FAM90A9PA6NNJ1 464 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 TBKBP1A7MCY6 615 aa3.76□□□□□ -1.81
HMGB1P12-201ENST00000438594 FAM90A5PA8MXJ8 464 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms