RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 PACRGLQ8N7B6 248 aa15□□□□□ -0.01
DDX56-205ENST00000433257 TERB1Q8NA31 727 aa15□□□□□ -0.01
DDX56-205ENST00000433257 BHLHE22Q8NFJ8 381 aaPredicted RBP15□□□□□ -0.01
DDX56-205ENST00000433257 BEST2Q8NFU1 509 aa15□□□□□ -0.01
DDX56-205ENST00000433257 CEP70Q8NHQ1 597 aa15□□□□□ -0.01
DDX56-205ENST00000433257 DIS3LQ8TF46 1054 aaKnown RBP15□□□□□ -0.01
DDX56-205ENST00000433257 RNF139Q8WU17 664 aa15□□□□□ -0.01
DDX56-205ENST00000433257 PBXIP1Q96AQ6 731 aa15□□□□□ -0.01
DDX56-205ENST00000433257 KIF12Q96FN5 646 aa15□□□□□ -0.01
DDX56-205ENST00000433257 AGAP3Q96P47 875 aa15□□□□□ -0.01
DDX56-205ENST00000433257 GPR22Q99680 433 aa15□□□□□ -0.01
DDX56-205ENST00000433257 RAB6CQ9H0N0 254 aa15□□□□□ -0.01
DDX56-205ENST00000433257 PNPLA3Q9NST1 481 aa15□□□□□ -0.01
DDX56-205ENST00000433257 TBCCD1Q9NVR7 557 aa15□□□□□ -0.01
DDX56-205ENST00000433257 KLHL8Q9P2G9 620 aaPredicted RBP15□□□□□ -0.01
DDX56-205ENST00000433257 RSL24D1Q9UHA3 163 aaKnown RBP15□□□□□ -0.01
DDX56-205ENST00000433257 PTBP2Q9UKA9 531 aaKnown RBP15□□□□□ -0.01
DDX56-205ENST00000433257 PSAT1Q9Y617 370 aa15□□□□□ -0.01
DDX56-205ENST00000433257 MFSD11O43934 449 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 TRMUO75648 421 aaKnown RBP14.99□□□□□ -0.01
DDX56-205ENST00000433257 ERVK-10P10266 1014 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 IMPDH2P12268 514 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 GOT1P17174 413 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 ERFP50548 548 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 THOP1P52888 689 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 NUP107P57740 925 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 MRPS22P82650 360 aaKnown RBP14.99□□□□□ -0.01
DDX56-205ENST00000433257 ZNF33AQ06730 810 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 PCBP1Q15365 356 aaKnown RBP eCLIP14.99□□□□□ -0.01
DDX56-205ENST00000433257 AMHR2Q16671 573 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 PPM1JQ5JR12 505 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 NAPEPLDQ6IQ20 393 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 MAMDC4Q6UXC1 1216 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 PID1Q7Z2X4 250 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 KCNMB4Q86W47 210 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 CCDC117Q8IWD4 279 aaPredicted RBP14.99□□□□□ -0.01
DDX56-205ENST00000433257 RBM12BQ8IXT5 1001 aaKnown RBP14.99□□□□□ -0.01
DDX56-205ENST00000433257 TMEM192Q8IY95 271 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 GOLM1Q8NBJ4 401 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 ZNF597Q96LX8 424 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 CNBD2Q96M20 576 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 SHCBP1LQ9BZQ2 653 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 RHOJQ9H4E5 214 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 GALNT8Q9NY28 637 aa14.99□□□□□ -0.01
DDX56-205ENST00000433257 CENPFP49454 3210 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 ZNF236Q9UL36 1845 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 A0A1B0GVG6 124 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 XPOTO43592 962 aaKnown RBP14.98□□□□□ -0.01
DDX56-205ENST00000433257 PFDN1O60925 122 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 MAP3K6O95382 1288 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 C22orf31O95567 290 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 MYCP01106 439 aaPredicted RBP14.98□□□□□ -0.01
DDX56-205ENST00000433257 FAM163BP0C2L3 166 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 PRKAR2AP13861 404 aaKnown RBP14.98□□□□□ -0.01
DDX56-205ENST00000433257 TFEBP19484 476 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 ARRB2P32121 409 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 TTKP33981 857 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 NOS2P35228 1153 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 MLH1P40692 756 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 PNPLA4P41247 253 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 SULT1E1P49888 294 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 CSRP3P50461 194 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 CDK9P50750 372 aaKnown RBP14.98□□□□□ -0.01
DDX56-205ENST00000433257 DNAJB13P59910 316 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 CDC42EP1Q00587 391 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 MYBPC1Q00872 1141 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 PTK2BQ14289 1009 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 SPATS1Q496A3 300 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 HACD2Q6Y1H2 254 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 PIWIL4Q7Z3Z4 852 aaKnown RBP14.98□□□□□ -0.01
DDX56-205ENST00000433257 ACOT1Q86TX2 421 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 ZNF567Q8N184 647 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 TRIML2Q8N7C3 387 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 DNAAF3Q8N9W5 541 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 CCNYQ8ND76 341 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 TSPAN14Q8NG11 270 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 STYXQ8WUJ0 223 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 NTAN1Q96AB6 310 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 EME1Q96AY2 570 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 ARMC5Q96C12 935 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 RCN3Q96D15 328 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 VPS39Q96JC1 886 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 MAELQ96JY0 434 aaKnown RBP14.98□□□□□ -0.01
DDX56-205ENST00000433257 ZNF560Q96MR9 790 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 SPATA33Q96N06 139 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 OR52B2Q96RD2 323 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 PRPF18Q99633 342 aaKnown RBP14.98□□□□□ -0.01
DDX56-205ENST00000433257 UNC93B1Q9H1C4 597 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 TASP1Q9H6P5 420 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 COPS7BQ9H9Q2 264 aaPredicted RBP14.98□□□□□ -0.01
DDX56-205ENST00000433257 EML4Q9HC35 981 aaKnown RBP14.98□□□□□ -0.01
DDX56-205ENST00000433257 HMX1Q9NP08 348 aaPredicted RBP14.98□□□□□ -0.01
DDX56-205ENST00000433257 VPS45Q9NRW7 570 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 SETD4Q9NVD3 440 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 UBAP1Q9NZ09 502 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 SARDHQ9UL12 918 aa14.98□□□□□ -0.01
DDX56-205ENST00000433257 A0A087X1B8 175 aa14.97□□□□□ -0.01
DDX56-205ENST00000433257 ACOT8O14734 319 aa14.97□□□□□ -0.01
DDX56-205ENST00000433257 CLASP2O75122 1294 aaKnown RBP14.97□□□□□ -0.01
DDX56-205ENST00000433257 PIGNO95427 931 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms