RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 PPM1LQ5SGD2 360 aa10.72□□□□□ -0.69
SMPD4-206ENST00000433118 SERINC5Q86VE9 423 aa10.72□□□□□ -0.69
SMPD4-206ENST00000433118 KCNMB4Q86W47 210 aa10.72□□□□□ -0.69
SMPD4-206ENST00000433118 CRYBG2Q8N1P7 616 aa10.72□□□□□ -0.69
SMPD4-206ENST00000433118 CAPNS2Q96L46 248 aa10.72□□□□□ -0.69
SMPD4-206ENST00000433118 SERPINI1Q99574 410 aa10.72□□□□□ -0.69
SMPD4-206ENST00000433118 TRPV6Q9H1D0 765 aa10.72□□□□□ -0.69
SMPD4-206ENST00000433118 SLC39A10Q9ULF5 831 aa10.72□□□□□ -0.69
SMPD4-206ENST00000433118 MYBPHLA2RUH7 354 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 H3BNX3 289 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 DAB1O75553 588 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 AP2A1O95782 977 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 PTPN3P26045 913 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 EPHA3P29320 983 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 NOS2P35228 1153 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 MAGEA12P43365 314 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 ALDH1A3P47895 512 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 FOLH1Q04609 750 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 MPP3Q13368 585 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 CERCAMQ5T4B2 595 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 SYPL2Q5VXT5 272 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 METTL21CQ5VZV1 264 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 TSNARE1Q96NA8 513 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 PPP1R10Q96QC0 940 aaKnown RBP10.71□□□□□ -0.69
SMPD4-206ENST00000433118 GATA5Q9BWX5 397 aaPredicted RBP10.71□□□□□ -0.69
SMPD4-206ENST00000433118 DNAI2Q9GZS0 605 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 LRRC4Q9HBW1 653 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 DMAP1Q9NPF5 467 aaPredicted RBP10.71□□□□□ -0.69
SMPD4-206ENST00000433118 IARS2Q9NSE4 1012 aaKnown RBP10.71□□□□□ -0.69
SMPD4-206ENST00000433118 PIGVQ9NUD9 493 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 ZCWPW2A0A1B0GU75 182 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 TK2O00142 265 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 XPO1O14980 1071 aaKnown RBP10.71□□□□□ -0.69
SMPD4-206ENST00000433118 CFLARO15519 480 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 TIMM44O43615 452 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 THRAP10827 490 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 CD1EP15812 388 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 TPH1P17752 444 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 ERCC2P18074 760 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 PIK3R1P27986 724 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 HOXC8P31273 242 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 GLRBP48167 497 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 ITGA7Q13683 1181 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 PAFAH1B3Q15102 231 aaKnown RBP10.71□□□□□ -0.69
SMPD4-206ENST00000433118 OTUD1Q5VV17 481 aaPredicted RBP10.71□□□□□ -0.69
SMPD4-206ENST00000433118 SEL1L3Q68CR1 1132 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 NXNQ6DKJ4 435 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 TMEM135Q86UB9 458 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 SIX6OS1Q8N1H7 587 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 ACVR1CQ8NER5 493 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 SLC7A14Q8TBB6 771 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 ISL2Q96A47 359 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 VPS39Q96JC1 886 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 SCYL1Q96KG9 808 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 TNIP3Q96KP6 325 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 ZCWPW1Q9H0M4 648 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 VCX3AQ9NNX9 186 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 CHRAC1Q9NRG0 131 aa10.71□□□□□ -0.69
SMPD4-206ENST00000433118 SHROOM3Q8TF72 1996 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 FAM72CH0Y354 149 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 ZBTB24O43167 697 aaPredicted RBP10.71□□□□□ -0.7
SMPD4-206ENST00000433118 RTN3O95197 1032 aaPredicted RBP10.71□□□□□ -0.7
SMPD4-206ENST00000433118 PTPN1P18031 435 aaKnown RBP10.71□□□□□ -0.7
SMPD4-206ENST00000433118 MSX2P35548 267 aaPredicted RBP10.71□□□□□ -0.7
SMPD4-206ENST00000433118 CCR10P46092 362 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 RPL34P49207 117 aaKnown RBP10.71□□□□□ -0.7
SMPD4-206ENST00000433118 CHN2P52757 468 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 PGGT1BP53609 377 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 DYNC1I2Q13409 638 aaKnown RBP10.71□□□□□ -0.7
SMPD4-206ENST00000433118 DPYSQ14117 519 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 FLOT2Q14254 428 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 PCBP1Q15365 356 aaKnown RBP eCLIP10.71□□□□□ -0.79e-6■■□□□ 13.3
SMPD4-206ENST00000433118 FAM72AQ5TYM5 149 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 FAM72DQ6L9T8 149 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 FBXL19Q6PCT2 694 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 C16orf89Q6UX73 402 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 ISLR2Q6UXK2 745 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 HFE2Q6ZVN8 426 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 PDZD4Q76G19 769 aaPredicted RBP10.71□□□□□ -0.7
SMPD4-206ENST00000433118 FAM72BQ86X60 149 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 PQLC1Q8N2U9 271 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 KYQ8NBH2 561 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 RAET1EQ8TD07 263 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 ACE2Q9BYF1 805 aaPredicted RBP10.71□□□□□ -0.7
SMPD4-206ENST00000433118 NUF2Q9BZD4 464 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 PRDM16Q9HAZ2 1276 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 UBP1Q9NZI7 540 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 TLK1Q9UKI8 766 aa10.71□□□□□ -0.7
SMPD4-206ENST00000433118 NUP205Q92621 2012 aa10.7□□□□□ -0.7
SMPD4-206ENST00000433118 C15orf38-AP3S2A0A0A6YYH1 394 aa10.7□□□□□ -0.7
SMPD4-206ENST00000433118 H2AFYO75367 372 aaKnown RBP10.7□□□□□ -0.7
SMPD4-206ENST00000433118 PGM3O95394 542 aa10.7□□□□□ -0.7
SMPD4-206ENST00000433118 AMHP03971 560 aa10.7□□□□□ -0.7
SMPD4-206ENST00000433118 ITGB1P05556 798 aa10.7□□□□□ -0.7
SMPD4-206ENST00000433118 GLDCP23378 1020 aa10.7□□□□□ -0.7
SMPD4-206ENST00000433118 GRIA4P48058 902 aa10.7□□□□□ -0.7
SMPD4-206ENST00000433118 ATXN3P54252 364 aaPredicted RBP10.7□□□□□ -0.7
SMPD4-206ENST00000433118 TPI1P60174 286 aa10.7□□□□□ -0.7
SMPD4-206ENST00000433118 MRPS22P82650 360 aaKnown RBP10.7□□□□□ -0.7
SMPD4-206ENST00000433118 LSM12Q3MHD2 195 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms