RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 PCSK1NQ9UHG2 260 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 SARDHQ9UL12 918 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 AP4E1Q9UPM8 1137 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 TNRC6BQ9UPQ9 1833 aaKnown RBP10.02□□□□□ -0.81
HDAC6-207ENST00000430858 GON4LQ3T8J9 2241 aa10.02□□□□□ -0.81
HDAC6-207ENST00000430858 FRYLO94915 3013 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 A0A1W2PPC4 97 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 SSU72P8A0A1W2PR75 194 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 C10orf142B7Z368 130 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 PLRG1O43660 514 aaKnown RBP10.01□□□□□ -0.81
HDAC6-207ENST00000430858 OPHN1O60890 802 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 ZNF821O75541 412 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-207ENST00000430858 CD160O95971 181 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 CYP1A2P05177 515 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 CTSLP07711 333 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 GRIA4P48058 902 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 CCR5P51681 352 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 AFF3P51826 1226 aaKnown RBP10.01□□□□□ -0.81
HDAC6-207ENST00000430858 METAP1P53582 386 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 GRIK2Q13002 908 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 UAP1L1Q3KQV9 507 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 PARP15Q460N3 678 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 CARD16Q5EG05 197 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 PPM1JQ5JR12 505 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 CCDC122Q5T0U0 273 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 AGBL4Q5VU57 503 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 IL27RAQ6UWB1 636 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 DPY19L3Q6ZPD9 716 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 ZNF354CQ86Y25 554 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 UMODL1-AS1Q8N2C9 162 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 MINDY1Q8N5J2 469 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 NIPA2Q8N8Q9 360 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 CASKIN2Q8WXE0 1202 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 PPP1R16AQ96I34 528 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 PEBP4Q96S96 227 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 DNAJC7Q99615 494 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 TNKS2Q9H2K2 1166 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 NOL6Q9H6R4 1146 aaKnown RBP10.01□□□□□ -0.81
HDAC6-207ENST00000430858 TM9SF3Q9HD45 589 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 DYRK4Q9NR20 520 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 DNAAF2Q9NVR5 837 aaKnown RBP10.01□□□□□ -0.81
HDAC6-207ENST00000430858 GPATCH2LQ9NWQ4 482 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 IL36AQ9UHA7 158 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 IP6K2Q9UHH9 426 aa10.01□□□□□ -0.81
HDAC6-207ENST00000430858 FCF1Q9Y324 198 aaKnown RBP10.01□□□□□ -0.81
HDAC6-207ENST00000430858 TBC1D3DA0A087WVF3 549 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 TBC1D3IA0A087WXS9 549 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 TBC1D3EA0A087X179 549 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 TBC1D3KA0A087X1G2 549 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 MED19A0JLT2 244 aaPredicted RBP10□□□□□ -0.81
HDAC6-207ENST00000430858 TBC1D3FA6NER0 549 aaPredicted RBP10□□□□□ -0.81
HDAC6-207ENST00000430858 UPK3BL1B0FP48 263 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 TBC1D3LB9A6J9 549 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 RASA4BC9J798 803 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 UPK3BL2E5RIL1 263 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 MYO1FO00160 1098 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 EEF2KO00418 725 aaKnown RBP10□□□□□ -0.81
HDAC6-207ENST00000430858 KPNA3O00505 521 aaPredicted RBP10□□□□□ -0.81
HDAC6-207ENST00000430858 DAPK3O43293 454 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 RASA4O43374 803 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 LATO43561 262 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 BUB1O43683 1085 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 LEFTY1O75610 366 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 TBC1D3HP0C7X1 549 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 CSRP1P21291 193 aaKnown RBP10□□□□□ -0.81
HDAC6-207ENST00000430858 NUDT1P36639 197 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 EIF4A3P38919 411 aaKnown RBP10□□□□□ -0.81
HDAC6-207ENST00000430858 HCAR3P49019 387 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 DNA2P51530 1060 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 CCNHP51946 323 aaPredicted RBP10□□□□□ -0.81
HDAC6-207ENST00000430858 NDST2P52849 883 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 RACK1P63244 317 aaKnown RBP10□□□□□ -0.81
HDAC6-207ENST00000430858 CNTN1Q12860 1018 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 SLC14A1Q13336 389 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 SLC18A3Q16572 532 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 CA9Q16790 459 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 POM121L1PQ3SYA9 428 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 BOLA3Q53S33 107 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 INO80DQ53TQ3 878 aaPredicted RBP10□□□□□ -0.81
HDAC6-207ENST00000430858 ARSIQ5FYB1 569 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 TBC1D3GQ6DHY5 549 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 TBC1D3CQ6IPX1 549 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 SARM1Q6SZW1 724 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 RFX8Q6ZV50 586 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 CYP4V2Q6ZWL3 525 aaPredicted RBP10□□□□□ -0.81
HDAC6-207ENST00000430858 TBC1D3Q8IZP1 549 aaPredicted RBP10□□□□□ -0.81
HDAC6-207ENST00000430858 CHST14Q8NCH0 376 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 SKA1Q96BD8 255 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 HMCESQ96FZ2 354 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 LRIG1Q96JA1 1093 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 HEPHQ9BQS7 1158 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 ORAI3Q9BRQ5 295 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 NUP85Q9BW27 656 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 HDAC8Q9BY41 377 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 DEF6Q9H4E7 631 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 ZWILCHQ9H900 591 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 PREBQ9HCU5 417 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 ABHD10Q9NUJ1 306 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 ANAPC7Q9UJX3 599 aa10□□□□□ -0.81
HDAC6-207ENST00000430858 NENFQ9UMX5 172 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms