RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 NKD2Q969F2 451 aaPredicted RBP11.21□□□□□ -0.61
CHD4-202ENST00000430771 MRGPRX3Q96LB0 322 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 RUNDC3BQ96NL0 473 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 VAT1Q99536 393 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 LGMNQ99538 433 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 SEPT10Q9P0V9 454 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 AMACRQ9UHK6 382 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 CDC23Q9UJX2 597 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 R3HDM2Q9Y2K5 976 aaKnown RBP11.21□□□□□ -0.61
CHD4-202ENST00000430771 NCOR1O75376 2440 aa11.21□□□□□ -0.61
CHD4-202ENST00000430771 EDDM13A0A1B0GTR0 161 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 BCLAF3A2AJT9 711 aaKnown RBP11.2□□□□□ -0.62
CHD4-202ENST00000430771 TMEM221A6NGB7 291 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 FAM170BA6NMN3 283 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 M0R296 226 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 MATN3O15232 486 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 ATP9BO43861 1147 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 ATG13O75143 517 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 GSRP00390 522 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 HOXB2P14652 356 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 VAV1P15498 845 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 NTSR1P30989 418 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 ACTN2P35609 894 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 IL12RB1P42701 662 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 RECQLP46063 649 aaPredicted RBP11.2□□□□□ -0.62
CHD4-202ENST00000430771 RPS9P46781 194 aaKnown RBP11.2□□□□□ -0.62
CHD4-202ENST00000430771 FNTAP49354 379 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 RHOAP61586 193 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 SNRPD1P62314 119 aaKnown RBP11.2□□□□□ -0.62
CHD4-202ENST00000430771 LMNB2Q03252 620 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 CYP1B1Q16678 543 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 HNRNPA1L2Q32P51 320 aaKnown RBP11.2□□□□□ -0.62
CHD4-202ENST00000430771 ACCSLQ4AC99 568 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 C2orf27AQ580R0 203 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 MARC1Q5VT66 337 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 CWF19L1Q69YN2 538 aaKnown RBP11.2□□□□□ -0.62
CHD4-202ENST00000430771 ITPRIPL1Q6GPH6 555 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 SFTPA1Q8IWL2 248 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 GRK7Q8WTQ7 553 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 C1orf54Q8WWF1 131 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 ISG20Q96AZ6 181 aaKnown RBP11.2□□□□□ -0.62
CHD4-202ENST00000430771 RPL10LQ96L21 214 aaKnown RBP11.2□□□□□ -0.62
CHD4-202ENST00000430771 GDAP1L1Q96MZ0 367 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 FAM118BQ9BPY3 351 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 CHRDQ9H2X0 955 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 FBRSQ9HAH7 460 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 LMAN1LQ9HAT1 526 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 RBM12Q9NTZ6 932 aaKnown RBP11.2□□□□□ -0.62
CHD4-202ENST00000430771 CACNA2D2Q9NY47 1150 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 SMARCAL1Q9NZC9 954 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 KLHL8Q9P2G9 620 aaPredicted RBP11.2□□□□□ -0.62
CHD4-202ENST00000430771 SUN2Q9UH99 717 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 DNPEPQ9ULA0 475 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 FCF1Q9Y324 198 aaKnown RBP11.2□□□□□ -0.62
CHD4-202ENST00000430771 MRFAP1Q9Y605 127 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 STON1Q9Y6Q2 735 aa11.2□□□□□ -0.62
CHD4-202ENST00000430771 CHURC1-FNTBB4DL54 471 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 SGK1O00141 431 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 KCNK1O00180 336 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 TNFRSF10AO00220 468 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 RNF103O00237 685 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 KCNN4O15554 427 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 SYNCRIPO60506 623 aaKnown RBP11.19□□□□□ -0.62
CHD4-202ENST00000430771 KLF8O95600 359 aaPredicted RBP11.19□□□□□ -0.62
CHD4-202ENST00000430771 ITGAVP06756 1048 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 EPHX1P07099 455 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 CCNB1P14635 433 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 PRKCHP24723 683 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 RBL1P28749 1068 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 CHRNA3P32297 505 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 MAPK8P45983 427 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 ENPP2Q13822 863 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 ELAVL3Q14576 367 aaKnown RBP11.19□□□□□ -0.62
CHD4-202ENST00000430771 OASLQ15646 514 aaKnown RBP11.19□□□□□ -0.62
CHD4-202ENST00000430771 DLG2Q15700 870 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 RALGPS1Q5JS13 557 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 LEKR1Q6ZMV7 388 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 ZNF687Q8N1G0 1237 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 ALLCQ8N6M5 410 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 PRELID2Q8N945 189 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 CCDC89Q8N998 374 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 IL17RCQ8NAC3 791 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 TXNDC5Q8NBS9 432 aaKnown RBP11.19□□□□□ -0.62
CHD4-202ENST00000430771 MNS1Q8NEH6 495 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 MAGOHBQ96A72 148 aaKnown RBP11.19□□□□□ -0.62
CHD4-202ENST00000430771 MYO19Q96H55 970 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 PSKH2Q96QS6 385 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 GABRG3Q99928 467 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 MGME1Q9BQP7 344 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 AP1M1Q9BXS5 423 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 POLR1EQ9GZS1 481 aaKnown RBP11.19□□□□□ -0.62
CHD4-202ENST00000430771 TMEM245Q9H330 911 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 MMP17Q9ULZ9 603 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 ZNF148Q9UQR1 794 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 SIT1Q9Y3P8 196 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 FARP1Q9Y4F1 1045 aaPredicted RBP11.19□□□□□ -0.62
CHD4-202ENST00000430771 TTLL3Q9Y4R7 772 aa11.19□□□□□ -0.62
CHD4-202ENST00000430771 TARSL2A2RTX5 802 aaKnown RBP11.18□□□□□ -0.62
CHD4-202ENST00000430771 TTC34A8MYJ7 566 aa11.18□□□□□ -0.62
CHD4-202ENST00000430771 K7ERQ8 282 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms