RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 RNASELQ05823 741 aaKnown RBP4.4□□□□□ -1.71
HMGB3-203ENST00000430118 CRHR2Q13324 411 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 MPP3Q13368 585 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 BFSP2Q13515 415 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 ACVR2BQ13705 512 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 LY6KQ17RY6 165 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 LRRC24Q50LG9 513 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 ZNF766Q5HY98 468 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 ANKRD40Q6AI12 368 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 GRHL2Q6ISB3 625 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 ATF7IPQ6VMQ6 1270 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 PTCHD4Q6ZW05 846 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 LNX2Q8N448 690 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 DEFB123Q8N688 67 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 ENDOVQ8N8Q3 282 aaKnown RBP4.4□□□□□ -1.71
HMGB3-203ENST00000430118 ADPRHL1Q8NDY3 354 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 CD99L2Q8TCZ2 262 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 STAMQ92783 540 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 ARRDC3Q96B67 414 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 LENG8Q96PV6 779 aaPredicted RBP4.4□□□□□ -1.71
HMGB3-203ENST00000430118 NR1H4Q96RI1 486 aaPredicted RBP4.4□□□□□ -1.71
HMGB3-203ENST00000430118 UTP14AQ9BVJ6 771 aaKnown RBP4.4□□□□□ -1.71
HMGB3-203ENST00000430118 CDCP1Q9H5V8 836 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 YY1AP1Q9H869 796 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 DBNDD1Q9H9R9 158 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 MYOZ2Q9NPC6 264 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 AKIP1Q9NQ31 210 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 PLSCR4Q9NRQ2 329 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 SNX15Q9NRS6 342 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 ALKBH4Q9NXW9 302 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 DKK2Q9UBU2 259 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 KNSTRNQ9Y448 316 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 PCDHA10Q9Y5I2 948 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 LYVE1Q9Y5Y7 322 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 ADAMTS20P59510 1910 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 LRRC37AA6NMS7 1700 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 UNC80Q8N2C7 3258 aa4.4□□□□□ -1.71
HMGB3-203ENST00000430118 FAM90A7PA6NKC0 464 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 FAM90A22PA8MWA6 464 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 FAM90A12PA8MX19 464 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 FAM90A23PA8MXZ1 464 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 B4DLN1 442 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 UBE2Q2LH0YL09 131 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 M0QZQ0 153 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 TNPO2O14787 897 aaKnown RBP4.39□□□□□ -1.71
HMGB3-203ENST00000430118 SPRY2O43597 315 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 C8AP07357 584 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 SLC3A2P08195 630 aaKnown RBP4.39□□□□□ -1.71
HMGB3-203ENST00000430118 IL6RP08887 468 aaPredicted RBP4.39□□□□□ -1.71
HMGB3-203ENST00000430118 ACP5P13686 325 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 CDH2P19022 906 aaPredicted RBP4.39□□□□□ -1.71
HMGB3-203ENST00000430118 GPTP24298 496 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 PRKCHP24723 683 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 ACRV1P26436 265 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 MLH1P40692 756 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 PIP4K2AP48426 406 aaPredicted RBP4.39□□□□□ -1.71
HMGB3-203ENST00000430118 TAS2R50P59544 299 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 UBXN2AP68543 259 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 DMTNQ08495 405 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 TOB2Q14106 344 aaPredicted RBP4.39□□□□□ -1.71
HMGB3-203ENST00000430118 RRP1BQ14684 758 aaKnown RBP4.39□□□□□ -1.71
HMGB3-203ENST00000430118 PTPRRQ15256 657 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 HLFQ16534 295 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 FAM69AQ5T7M9 428 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 VWA1Q6PCB0 445 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 KLHL24Q6TFL4 600 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 MAVSQ7Z434 540 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 WDR53Q7Z5U6 358 aaPredicted RBP4.39□□□□□ -1.71
HMGB3-203ENST00000430118 PXKQ7Z7A4 578 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 CPLX4Q7Z7G2 160 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 P3H2Q8IVL5 708 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 SIRT6Q8N6T7 355 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 FKBP10Q96AY3 582 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 FAM122AQ96E09 287 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 SAAL1Q96ER3 474 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 MYEOVQ96EZ4 313 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 TRMT61AQ96FX7 289 aaKnown RBP4.39□□□□□ -1.71
HMGB3-203ENST00000430118 PBKQ96KB5 322 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 C5orf34Q96MH7 638 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 DPCDQ9BVM2 203 aaPredicted RBP4.39□□□□□ -1.71
HMGB3-203ENST00000430118 SSBP3Q9BWW4 388 aaPredicted RBP4.39□□□□□ -1.71
HMGB3-203ENST00000430118 RMI1Q9H9A7 625 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 SLC22A11Q9NSA0 550 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 KLC4Q9NSK0 619 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 TBCCD1Q9NVR7 557 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 HAUS2Q9NVX0 235 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 EHD3Q9NZN3 535 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 KCND2Q9NZV8 630 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 MPP6Q9NZW5 540 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 TBC1D29Q9UFV1 150 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 RAB21Q9UL25 225 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 SLC12A4Q9UP95 1085 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 NAALADL1Q9UQQ1 740 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 RCE1Q9Y256 329 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 USP16Q9Y5T5 823 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 COPG1Q9Y678 874 aaKnown RBP4.39□□□□□ -1.71
HMGB3-203ENST00000430118 DUSP10Q9Y6W6 482 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 KDM3BQ7LBC6 1761 aa4.39□□□□□ -1.71
HMGB3-203ENST00000430118 UBN2Q6ZU65 1347 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms