RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 CD72P21854 359 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 SFPQP23246 707 aaKnown RBP eCLIP3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 AVPR2P30518 371 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 MCM2P49736 904 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 AGTR2P50052 363 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZNF84P51523 738 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 RCAN1P53805 252 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 TAS2R50P59544 299 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 ARF3P61204 181 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 RPS3AP61247 264 aaKnown RBP3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 IFI35P80217 286 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 ARF1P84077 181 aaKnown RBP3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 TSPY1Q01534 308 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 CREB5Q02930 508 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 TLE3Q04726 772 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 PTP4A2Q12974 167 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 GAB1Q13480 694 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 EIF4A2Q14240 407 aaKnown RBP3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZNF569Q5MCW4 686 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 TMEM88Q6PEY1 159 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 SLC2A7Q6PXP3 512 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 ATF7IPQ6VMQ6 1270 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 RBM44Q6ZP01 1051 aaKnown RBP3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 CPLX4Q7Z7G2 160 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 MON1AQ86VX9 555 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 TTC30BQ8N4P2 665 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 NKAIN3Q8N8D7 197 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 FSIP1Q8NA03 581 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 KAT2BQ92831 832 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 CELF1Q92879 486 aaKnown RBP3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 ARRDC3Q96B67 414 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 RNFT2Q96EX2 444 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 MASTLQ96GX5 879 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZMAT2Q96NC0 199 aaKnown RBP3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 NR1H4Q96RI1 486 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 SIGLEC11Q96RL6 698 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 SLF1Q9BQI6 1058 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 TMEM79Q9BSE2 394 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 WACQ9BTA9 647 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 ELOVL1Q9BW60 279 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 CTDSP1Q9GZU7 261 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZCCHC17Q9NP64 241 aaKnown RBP3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 MRGBPQ9NV56 204 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 TBC1D14Q9P2M4 693 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 HDAC6Q9UBN7 1215 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 SLC25A10Q9UBX3 287 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 SARDHQ9UL12 918 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 NOL7Q9UMY1 257 aaKnown RBP3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 GDAQ9Y2T3 454 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 KAT6AQ92794 2004 aa3.2□□□□□ -1.9
HMGB1P9-201ENST00000429856 EMSYQ7Z589 1322 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZNF335Q9H4Z2 1342 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 MBD3L5A6NJ08 208 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 SAC3D1A6NKF1 404 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 C17orf100A8MU93 164 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 RRHO14718 337 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 SYN3O14994 580 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 TP73O15350 636 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 FGBP02675 491 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 URODP06132 367 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 CLTBP09497 229 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 CTSAP10619 480 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 UBL4AP11441 157 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 IDUAP35475 653 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 COPB2P35606 906 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 PNPLA4P41247 253 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 GARSP41250 739 aaKnown RBP3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 STAT6P42226 847 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 PAFAH1B1P43034 410 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 CLNS1AP54105 237 aaKnown RBP3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 NAP1L1P55209 391 aaKnown RBP3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 FOXG1P55316 489 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 YPEL5P62699 121 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 MC1RQ01726 317 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZNF91Q05481 1191 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 DMWDQ09019 674 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 MTA1Q13330 715 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 STIM1Q13586 685 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 ACVR2BQ13705 512 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 TBRG1Q3YBR2 411 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 FAM133BQ5BKY9 247 aaKnown RBP3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZNF667Q5HYK9 610 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 SH2D4BQ5SQS7 431 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 CFAP58Q5T655 872 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 RPUSD3Q6P087 351 aaKnown RBP3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 SLC39A5Q6ZMH5 540 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 MRPL10Q7Z7H8 261 aaKnown RBP3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 ANKRD13BQ86YJ7 626 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 RFX6Q8HWS3 928 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 ADSSL1Q8N142 457 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 TTC39CQ8N584 583 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 WDTC1Q8N5D0 677 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 PLD5Q8N7P1 536 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 ANKRD44Q8N8A2 993 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 PTGR2Q8N8N7 351 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 FAM47BQ8NA70 645 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 C16orf52Q8NHV5 167 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 NFKBIDQ8NI38 313 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZFPM2Q8WW38 1151 aa3.19□□□□□ -1.9
HMGB1P9-201ENST00000429856 USP6NLQ92738 828 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms