RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 CNTFP26441 200 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 OVGP1Q12889 678 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 DNAJC3Q13217 504 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 LRRC38Q5VT99 294 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 COLGALT2Q8IYK4 626 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 NAF1Q96HR8 494 aaKnown RBP17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 FUBP3Q96I24 572 aaKnown RBP eCLIP17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 DLG5Q8TDM6 1919 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 LRRC72A6NJI9 287 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 SLC31A1O15431 190 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 CPA3P15088 417 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 KCNA5P22460 613 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 SLC8A1P32418 973 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 IL2P60568 153 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 AAK1Q2M2I8 961 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 TXNDC8Q6A555 127 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 XYLT1Q86Y38 959 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 HMGB4Q8WW32 186 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 IRGQQ8WZA9 623 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 SH3BP4Q9P0V3 963 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 V9GYQ6 96 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 A0A1B0GVM2 712 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 TCAF2A6NFQ2 919 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 AP5Z1O43299 807 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 IQCF3P0C7M6 154 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 CENPAP49450 140 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 PLK1P53350 603 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 PATL1Q86TB9 770 aaKnown RBP17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 TAC4Q86UU9 113 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 TSTD1Q8NFU3 115 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 OR7D4Q8NG98 312 aa17.32■□□□□ 0.36
SMARCA4-203ENST00000429416 PJA2O43164 708 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 TIE1P35590 1138 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 CAPZA2P47755 286 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 MEA1Q16626 185 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 ECSITQ9BQ95 431 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 PTPRHQ9HD43 1115 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 PHPT1Q9NRX4 125 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 IMP3Q9NV31 184 aaKnown RBP17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 KLHL3Q9UH77 587 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 CLUHO75153 1309 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 KANSL1LA0AUZ9 987 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 H3BMM5 538 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 TBX18O95935 607 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 COL6A1P12109 1028 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 LPOP22079 712 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 ADSSP30520 456 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 SUSD3Q96L08 255 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 WRAP53Q9BUR4 548 aaKnown RBP17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 TLR10Q9BXR5 811 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 ACTR5Q9H9F9 607 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 TRPC4Q9UBN4 977 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 HBS1LQ9Y450 684 aaKnown RBP17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 SNX8Q9Y5X2 465 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 CRYBG1Q9Y4K1 1723 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 CFIP05156 583 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 ANXA11P50995 505 aaKnown RBP17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 SOWAHAQ2M3V2 549 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 CST9Q5W186 159 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 KLHL23Q8NBE8 558 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 NMRAL1Q9HBL8 299 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 GKN1Q9NS71 199 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 ABRQ12979 859 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 FUT11Q495W5 492 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 GRTP1Q5TC63 336 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 CNSTQ6PJW8 725 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 SUGP1Q8IWZ8 645 aaKnown RBP17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 GID8Q9NWU2 228 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 GNPTGQ9UJJ9 305 aa17.31■□□□□ 0.36
SMARCA4-203ENST00000429416 ZNF865P0CJ78 1059 aaPredicted RBP17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 MMP8P22894 467 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 FBXO6Q9NRD1 293 aaPredicted RBP17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 ABCB8Q9NUT2 735 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 A0A096LPK6 155 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 FAM47E-STBD1D6RA91 191 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 GRM3Q14832 879 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 NPY5RQ15761 445 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 MBOAT7Q96N66 472 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 FERD3LQ96RJ6 166 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 FAM126AQ9BYI3 521 aaPredicted RBP17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 PARVBQ9HBI1 364 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 ASF1AQ9Y294 204 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 RGPD2P0DJD1 1756 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 EIF3HO15372 352 aaKnown RBP eCLIP17.3■□□□□ 0.361e-6■□□□□ 8.3
SMARCA4-203ENST00000429416 SLC2A4P14672 509 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 MDH1P40925 334 aaKnown RBP17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 AIF1P55008 147 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 TAS2R40P59535 323 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 VITQ6UXI7 678 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 BAP1Q92560 729 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 YY1AP1Q9H869 796 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 PCDH18Q9HCL0 1135 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 PLA2G4EQ3MJ16 856 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 ANKS1BQ7Z6G8 1248 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 CLIP3Q96DZ5 547 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 C16orf70Q9BSU1 422 aa17.3■□□□□ 0.36
SMARCA4-203ENST00000429416 DMGDHQ9UI17 866 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms