RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 ZNHIT3Q15649 155 aaPredicted RBP7.34□□□□□ -1.23
CNOT4-206ENST00000428680 FSCBQ5H9T9 825 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 ATAD3BQ5T9A4 648 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 ZNF776Q68DI1 518 aaPredicted RBP7.34□□□□□ -1.23
CNOT4-206ENST00000428680 TATDN2Q93075 761 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 OSBPL6Q9BZF3 934 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 FGFR1OP2Q9NVK5 253 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 FBXL12Q9NXK8 326 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 UTRNP46939 3433 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 NCF1BA6NI72 391 aaPredicted RBP7.34□□□□□ -1.23
CNOT4-206ENST00000428680 FAM170BA6NMN3 283 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 NCF1CA8MVU1 366 aaPredicted RBP7.34□□□□□ -1.23
CNOT4-206ENST00000428680 RASA4BC9J798 803 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 ENPP3O14638 875 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 RASA4O43374 803 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 DIAPH2O60879 1101 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 NCF1P14598 390 aaPredicted RBP7.34□□□□□ -1.23
CNOT4-206ENST00000428680 HNF1BP35680 557 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 CLK2P49760 499 aaKnown RBP7.34□□□□□ -1.23
CNOT4-206ENST00000428680 RGS1Q08116 209 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 ITGB3BPQ13352 177 aaPredicted RBP7.34□□□□□ -1.23
CNOT4-206ENST00000428680 ITGA9Q13797 1035 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 MTF1Q14872 753 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 CNGA2Q16280 664 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 SLC18A3Q16572 532 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 FBXO38Q6PIJ6 1188 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 ANO5Q75V66 913 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 NUDCD3Q8IVD9 361 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 CFAP52Q8N1V2 620 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 COL26A1Q96A83 441 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 KLHDC7BQ96G42 594 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 SNF8Q96H20 258 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 RSRC1Q96IZ7 334 aaKnown RBP7.34□□□□□ -1.23
CNOT4-206ENST00000428680 BTN2A3PQ96KV6 586 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 ACBD6Q9BR61 282 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 FAM167BQ9BTA0 163 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 EIF2AQ9BY44 585 aaKnown RBP7.34□□□□□ -1.23
CNOT4-206ENST00000428680 TRIM55Q9BYV6 548 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 ABHD10Q9NUJ1 306 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 AGO1Q9UL18 857 aaKnown RBP7.34□□□□□ -1.23
CNOT4-206ENST00000428680 A0A087WUV0 522 aaPredicted RBP7.34□□□□□ -1.24
CNOT4-206ENST00000428680 H3BMM5 538 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 KPNA5O15131 536 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 GGCXP38435 758 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 ACTR1BP42025 376 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 CLCN5P51795 746 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 ACTR1AP61163 376 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 NAA25Q14CX7 972 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 TBC1D25Q3MII6 688 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 FBXO43Q4G163 708 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 AGAP9Q5VTM2 703 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 GJB7Q6PEY0 223 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 B4GALNT4Q76KP1 1039 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 CCDC185Q8N715 623 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 PHC3Q8NDX5 983 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 SLC22A17Q8WUG5 538 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 CD101Q93033 1021 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 MAGED4Q96JG8 741 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 B3GALT6Q96L58 329 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 C16orf70Q9BSU1 422 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 NAT9Q9BTE0 207 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 FRMD8Q9BZ67 464 aaPredicted RBP7.34□□□□□ -1.24
CNOT4-206ENST00000428680 CDH19Q9H159 772 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 EBF3Q9H4W6 596 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 TUBGCP4Q9UGJ1 667 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 ENTPD4Q9Y227 616 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 COLEC10Q9Y6Z7 277 aa7.34□□□□□ -1.24
CNOT4-206ENST00000428680 A0A1W2PQH9 124 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 KCNK1O00180 336 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 KHNYNO15037 678 aaKnown RBP7.33□□□□□ -1.24
CNOT4-206ENST00000428680 RRP8O43159 456 aaKnown RBP7.33□□□□□ -1.24
CNOT4-206ENST00000428680 ZNF862O60290 1169 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 TSPAN1O60635 241 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 MLYCDO95822 493 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 FTH1P02794 183 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 UQCRBP14927 111 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 TRPC1P48995 793 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 SLC11A1P49279 550 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 GNA13Q14344 377 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 POU6F1Q14863 301 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 EFTUD2Q15029 972 aaKnown RBP eCLIP7.33□□□□□ -1.24
CNOT4-206ENST00000428680 PAGE2BQ5JRK9 111 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 TRMT10CQ7L0Y3 403 aaKnown RBP7.33□□□□□ -1.24
CNOT4-206ENST00000428680 ANKMY2Q8IV38 441 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 STK40Q8N2I9 435 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 FBXL6Q8N531 539 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 KIAA1958Q8N8K9 716 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 POMGNT2Q8NAT1 580 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 AVL9Q8NBF6 648 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 VN1R2Q8NFZ6 395 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 SGF29Q96ES7 293 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 QRFPRQ96P65 431 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 HEPHQ9BQS7 1158 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 TRIM15Q9C019 465 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 PCDHGA4Q9Y5G9 962 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 KIAA1217Q5T5P2 1943 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 PIPSLA2A3N6 862 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 SYCE1LA8MT33 242 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 ANKRD63C9JTQ0 380 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 FFAR2O15552 330 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms