RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CHADO15335 359 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 NCAM2O15394 837 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 HOXC11O43248 304 aaPredicted RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 WIPF1O43516 503 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 MAFO75444 373 aaPredicted RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 B3GALNT1O75752 331 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 UPK1BO75841 260 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 SUPT7LO94864 414 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 MFN2O95140 757 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 NDST3O95803 873 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 JUNP05412 331 aaKnown RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 CSF1RP07333 972 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 NR3C2P08235 984 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 WEE2P0C1S8 567 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 TRIM49P0CI25 452 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 TRIM49CP0CI26 452 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 TSPY3P0CV98 308 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 TSPY8P0CW00 308 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 UMPSP11172 480 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 RALAP11233 206 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZNF182P17025 639 aaPredicted RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 CHRNB2P17787 502 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 TCN1P20061 433 aaPredicted RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 ENPP1P22413 925 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 FASP25445 335 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 ADORA1P30542 326 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 PRKAR1BP31321 381 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 SERPINB5P36952 375 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 TALDO1P37837 337 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 EIF2DP41214 584 aaKnown RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 RPS5P46782 204 aaKnown RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 OR3A3P47888 321 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 HARS2P49590 506 aaKnown RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 RAD23AP54725 363 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 PRAMEP78395 509 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 TSPY1Q01534 308 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 GHRHRQ02643 423 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 GNA12Q03113 381 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 GAD2Q05329 585 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 FSTL1Q12841 308 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 KLF10Q13118 480 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 SLC39A6Q13433 755 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 IL18R1Q13478 541 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 BFSP2Q13515 415 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 UBAP2LQ14157 1087 aaKnown RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 TFDP1Q14186 410 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 ACOX1Q15067 660 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 AGERQ15109 404 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 PDK2Q15119 407 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 LRRC41Q15345 812 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 GRIK5Q16478 980 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 LRIT3Q3SXY7 679 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 NHSL2Q5HYW2 709 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 MDH1BQ5I0G3 518 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 TRAPPC3LQ5T215 181 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 TTC23Q5W5X9 447 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 TIGD3Q6B0B8 471 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 DPY19L2P1Q6NXN4 242 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 PAOXQ6QHF9 649 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 CRTC3Q6UUV7 619 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 HACD2Q6Y1H2 254 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 UNC5AQ6ZN44 842 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 TMEM26Q6ZUK4 368 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 CREB3L2Q70SY1 520 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 CYS1Q717R9 158 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 SH3BP5LQ7L8J4 393 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 NIPA1Q7RTP0 329 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 ERMP1Q7Z2K6 904 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 SLCO6A1Q86UG4 719 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 CATSPER3Q86XQ3 398 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 RHPN2Q8IUC4 686 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 RNF135Q8IUD6 432 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 TBC1D21Q8IYX1 336 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 SAMD14Q8IZD0 417 aaPredicted RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 IFNL2Q8IZJ0 200 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 DSELQ8IZU8 1212 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 LGI2Q8N0V4 545 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 AMER2Q8N7J2 671 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZBTB38Q8NAP3 1195 aaPredicted RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 FBXO36Q8NEA4 188 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 RDH11Q8TC12 318 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 LRRC20Q8TCA0 184 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 TBCKQ8TEA7 893 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 FBXL8Q96CD0 374 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 ERLEC1Q96DZ1 483 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 MAELQ96JY0 434 aaKnown RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 BTBD6Q96KE9 485 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 BTN2A3PQ96KV6 586 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 CPXM1Q96SM3 734 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 PKP2Q99959 881 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 LBHD1Q9BQE6 289 aaPredicted RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 NAT9Q9BTE0 207 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 CCDC32Q9BV29 185 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 KIFC1Q9BW19 673 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 C1QTNF2Q9BXJ5 285 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 SLC13A1Q9BZW2 595 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 ADNPQ9H2P0 1102 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 OR51B5Q9H339 312 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms