RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 CASP6P55212 293 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 GAD2Q05329 585 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 LMOD3Q0VAK6 560 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 MTX1Q13505 466 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 RALBP1Q15311 655 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 SLC18A3Q16572 532 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 EDRF1Q3B7T1 1238 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 EARS2Q5JPH6 523 aaKnown RBP2.63□□□□□ -1.99
PTPRC-208ENST00000427110 FAM69AQ5T7M9 428 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 TMEM268Q5VZI3 342 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 NAPEPLDQ6IQ20 393 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 ACAD10Q6JQN1 1059 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 HMBOX1Q6NT76 420 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 GJB7Q6PEY0 223 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 MRPL10Q7Z7H8 261 aaKnown RBP2.63□□□□□ -1.99
PTPRC-208ENST00000427110 DDIASQ8IXT1 998 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 EXD3Q8N9H8 876 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 PCYOX1LQ8NBM8 494 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 LSM14AQ8ND56 463 aaKnown RBP2.63□□□□□ -1.99
PTPRC-208ENST00000427110 PPHLN1Q8NEY8 458 aaKnown RBP2.63□□□□□ -1.99
PTPRC-208ENST00000427110 CMASQ8NFW8 434 aaPredicted RBP2.63□□□□□ -1.99
PTPRC-208ENST00000427110 TNIP2Q8NFZ5 429 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 BCAS4Q8TDM0 211 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 PIGOQ8TEQ8 1089 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 WIPF2Q8TF74 440 aaPredicted RBP2.63□□□□□ -1.99
PTPRC-208ENST00000427110 TBC1D22AQ8WUA7 517 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 UCMAQ8WVF2 138 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 FAR1Q8WVX9 515 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 RAB40AQ8WXH6 277 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 HSPH1Q92598 858 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 MPHOSPH8Q99549 860 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 TMEM79Q9BSE2 394 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 PIMREGQ9BSJ6 248 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.63□□□□□ -1.99
PTPRC-208ENST00000427110 PHF7Q9BWX1 381 aaPredicted RBP2.63□□□□□ -1.99
PTPRC-208ENST00000427110 LMAN2LQ9H0V9 348 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 SLC25A18Q9H1K4 315 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 HIPK3Q9H422 1215 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 ACTR5Q9H9F9 607 aaPredicted RBP2.63□□□□□ -1.99
PTPRC-208ENST00000427110 IL1RAPL1Q9NZN1 696 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 ZNF69Q9UC07 566 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 CDH22Q9UJ99 828 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 ICKQ9UPZ9 632 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 CAMK2AQ9UQM7 478 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 LAMP3Q9UQV4 416 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 OSGIN2Q9Y236 505 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 CNPY2Q9Y2B0 182 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 TMEM98Q9Y2Y6 226 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.63□□□□□ -1.99
PTPRC-208ENST00000427110 ZMYM2Q9UBW7 1377 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 H3BNX3 289 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 NEURL1O76050 574 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 RTN3O95197 1032 aaPredicted RBP2.62□□□□□ -1.99
PTPRC-208ENST00000427110 DDAH2O95865 285 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 ADAP00813 363 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 LCKP06239 509 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 CHRM4P08173 479 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 NR1H2P55055 460 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 GEMIN4P57678 1058 aaKnown RBP2.62□□□□□ -1.99
PTPRC-208ENST00000427110 EFNB1P98172 346 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 CAMK1Q14012 370 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 SEMA3AQ14563 771 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 PLK5Q496M5 336 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 FBXO43Q4G163 708 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 MIDNQ504T8 468 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 ENTPD8Q5MY95 495 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 TTC39AQ5SRH9 613 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 UBAP2Q5T6F2 1119 aaKnown RBP2.62□□□□□ -1.99
PTPRC-208ENST00000427110 ISM2Q6H9L7 571 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 AAGABQ6PD74 315 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 RRM2BQ7LG56 351 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 MON1AQ86VX9 555 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 WDR5BQ86VZ2 330 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 CHD1LQ86WJ1 897 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 ARMC8Q8IUR7 673 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 FAM185AQ8N0U4 392 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 TSPYL6Q8N831 410 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 LRRC57Q8N9N7 239 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 SETD9Q8NE22 299 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 CENPIQ92674 756 aaPredicted RBP2.62□□□□□ -1.99
PTPRC-208ENST00000427110 HDAC2Q92769 488 aaKnown RBP2.62□□□□□ -1.99
PTPRC-208ENST00000427110 EME1Q96AY2 570 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 SKA1Q96BD8 255 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 CLMNQ96JQ2 1002 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 TEFMQ96QE5 360 aaKnown RBP2.62□□□□□ -1.99
PTPRC-208ENST00000427110 FRG2BQ96QU4 278 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 FUZQ9BT04 418 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 AGXT2Q9BYV1 514 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 FRMD8Q9BZ67 464 aaPredicted RBP2.62□□□□□ -1.99
PTPRC-208ENST00000427110 PDCL3Q9H2J4 239 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 EBF3Q9H4W6 596 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 CXorf56Q9H5V9 222 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 BEX4Q9NWD9 120 aaPredicted RBP2.62□□□□□ -1.99
PTPRC-208ENST00000427110 PEMTQ9UBM1 199 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 HDAC6Q9UBN7 1215 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 AGO2Q9UKV8 859 aaKnown RBP2.62□□□□□ -1.99
PTPRC-208ENST00000427110 PNMA2Q9UL42 364 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 COG5Q9UP83 839 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 RAP2CQ9Y3L5 183 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 CYP46A1Q9Y6A2 500 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms