RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 WASH4PA8MWX3 477 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 TBC1D3LB9A6J9 549 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 C1QTNF3-AMACRE9PGA6 284 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 KCNK3O14649 394 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 SLC7A4O43246 635 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 SH3BP5O60239 455 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 WNT1P04628 370 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 GYPCP04921 128 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 TBC1D3HP0C7X1 549 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 EPHB2P29323 1055 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 GRIA4P48058 902 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 AIF1P55008 147 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 ZBED6P86452 979 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 SLC14A1Q13336 389 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 CA9Q16790 459 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 ARSIQ5FYB1 569 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 PIP5KL1Q5T9C9 394 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 TBC1D3GQ6DHY5 549 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 TBC1D3CQ6IPX1 549 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 CYP4V2Q6ZWL3 525 aaPredicted RBP18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 TBC1D3Q8IZP1 549 aaPredicted RBP18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 RTL3Q8N8U3 475 aaKnown RBP18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 SLC6A18Q96N87 628 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 CEP44Q9C0F1 390 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 KDM4CQ9H3R0 1056 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 GPATCH2LQ9NWQ4 482 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 FNDC3AQ9Y2H6 1198 aaKnown RBP18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 WASF2Q9Y6W5 498 aa18.71■□□□□ 0.59
SMARCAL1-205ENST00000425815 PI4KAP42356 2102 aa18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 A0A1W2PR77 199 aa18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 LATO43561 262 aa18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 KDELR3O43731 214 aa18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 CREB3O43889 395 aa18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 RAMP2O60895 175 aa18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 LEFTY1O75610 366 aa18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 RACK1P63244 317 aaKnown RBP18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 POLD3Q15054 466 aaPredicted RBP18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 CARD16Q5EG05 197 aa18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 LEKR1Q6ZMV7 388 aa18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 DBX2Q6ZNG2 339 aa18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 FNIP1Q8TF40 1166 aa18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 XPO4Q9C0E2 1151 aaKnown RBP18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 IL36AQ9UHA7 158 aa18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 PCSK1NQ9UHG2 260 aa18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 WASF3Q9UPY6 502 aa18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 FARP1Q9Y4F1 1045 aaPredicted RBP18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 BZW2Q9Y6E2 419 aaKnown RBP18.7■□□□□ 0.58
SMARCAL1-205ENST00000425815 CNOT1A5YKK6 2376 aaKnown RBP18.69■□□□□ 0.58
SMARCAL1-205ENST00000425815 VILLO15195 856 aa18.69■□□□□ 0.58
SMARCAL1-205ENST00000425815 SERPING1P05155 500 aa18.69■□□□□ 0.58
SMARCAL1-205ENST00000425815 MIPP30301 263 aa18.69■□□□□ 0.58
SMARCAL1-205ENST00000425815 ETFBP38117 255 aa18.69■□□□□ 0.58
SMARCAL1-205ENST00000425815 CTSKP43235 329 aa18.69■□□□□ 0.58
SMARCAL1-205ENST00000425815 IL27RAQ6UWB1 636 aa18.69■□□□□ 0.58
SMARCAL1-205ENST00000425815 PLPP6Q8IY26 295 aa18.69■□□□□ 0.58
SMARCAL1-205ENST00000425815 PCDH20Q8N6Y1 951 aaKnown RBP18.69■□□□□ 0.58
SMARCAL1-205ENST00000425815 ISG20Q96AZ6 181 aaKnown RBP18.69■□□□□ 0.58
SMARCAL1-205ENST00000425815 ZNF653Q96CK0 615 aa18.69■□□□□ 0.58
SMARCAL1-205ENST00000425815 MYO1AQ9UBC5 1043 aa18.69■□□□□ 0.58
SMARCAL1-205ENST00000425815 ADAMTS9Q9P2N4 1935 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 ASCC3Q8N3C0 2202 aaKnown RBP18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 A0A087X0T9 212 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 SPAARA0A1B0GVQ0 90 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 KPNA3O00505 521 aaPredicted RBP18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 CBFA2T3O75081 653 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 TOP3BO95985 862 aaKnown RBP18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 PRNPP04156 253 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 FAM228BP0C875 321 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 ZNF883P0CG24 379 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 CASP14P31944 242 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 GKP32189 559 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 DNA2P51530 1060 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 TEAD4Q15561 434 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 ERMARDQ5T6L9 678 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 TRIM69Q86WT6 500 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 UMODL1-AS1Q8N2C9 162 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 NETO2Q8NC67 525 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 GRIN3AQ8TCU5 1115 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 HMCESQ96FZ2 354 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 CCDC114Q96M63 670 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 KCTD15Q96SI1 283 aaPredicted RBP18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 EPAS1Q99814 870 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 HEPHQ9BQS7 1158 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 SNRNP25Q9BV90 132 aaKnown RBP18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 HDAC8Q9BY41 377 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 SLC32A1Q9H598 525 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 TM7SF3Q9NS93 570 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 NENFQ9UMX5 172 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 AP4E1Q9UPM8 1137 aa18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 LUC7L2Q9Y383 392 aaKnown RBP18.68■□□□□ 0.58
SMARCAL1-205ENST00000425815 RASA4BC9J798 803 aa18.67■□□□□ 0.58
SMARCAL1-205ENST00000425815 H0Y8X5 98 aa18.67■□□□□ 0.58
SMARCAL1-205ENST00000425815 RASA4O43374 803 aa18.67■□□□□ 0.58
SMARCAL1-205ENST00000425815 LRCH4O75427 683 aa18.67■□□□□ 0.58
SMARCAL1-205ENST00000425815 CER1O95813 267 aa18.67■□□□□ 0.58
SMARCAL1-205ENST00000425815 MYBL1P10243 752 aa18.67■□□□□ 0.58
SMARCAL1-205ENST00000425815 IL1R2P27930 398 aa18.67■□□□□ 0.58
SMARCAL1-205ENST00000425815 MAT2AP31153 395 aaKnown RBP18.67■□□□□ 0.58
SMARCAL1-205ENST00000425815 CCNHP51946 323 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms