RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 RNASEH2BQ5TBB1 312 aaKnown RBP15.97■□□□□ 0.15
SHOX2-202ENST00000425436 KCTD16Q68DU8 428 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 LRRC31Q6UY01 552 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 PPP1R21Q6ZMI0 780 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 LEKR1Q6ZMV7 388 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 CDKL3Q8IVW4 592 aaPredicted RBP15.97■□□□□ 0.15
SHOX2-202ENST00000425436 OR2W6PQ8NHA6 318 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 PCDH19Q8TAB3 1148 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 WFDC5Q8TCV5 224 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 RTP4Q96DX8 246 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 SERPINB12Q96P63 405 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 RBM15Q96T37 977 aaKnown RBP eCLIP15.97■□□□□ 0.15
SHOX2-202ENST00000425436 FERMT1Q9BQL6 677 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 CAPS2Q9BXY5 557 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 CNOT10Q9H9A5 744 aaKnown RBP15.97■□□□□ 0.15
SHOX2-202ENST00000425436 PAK5Q9P286 719 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 DEC1Q9P2X7 70 aa15.97■□□□□ 0.15
SHOX2-202ENST00000425436 TYW5A2RUC4 315 aaKnown RBP15.96■□□□□ 0.15
SHOX2-202ENST00000425436 FAM86C2PA6NEL3 165 aa15.96■□□□□ 0.15
SHOX2-202ENST00000425436 FAM170BA6NMN3 283 aa15.96■□□□□ 0.15
SHOX2-202ENST00000425436 HACD1B0YJ81 288 aa15.96■□□□□ 0.15
SHOX2-202ENST00000425436 H3BRJ5 948 aa15.96■□□□□ 0.15
SHOX2-202ENST00000425436 RGS16O15492 202 aaPredicted RBP15.96■□□□□ 0.15
SHOX2-202ENST00000425436 SHOX2O60902 331 aaPredicted RBP15.96■□□□□ 0.15
SHOX2-202ENST00000425436 AGTP01019 485 aa15.96■□□□□ 0.15
SHOX2-202ENST00000425436 NUMBP49757 651 aa15.96■□□□□ 0.15
SHOX2-202ENST00000425436 STAT4Q14765 748 aa15.96■□□□□ 0.15
SHOX2-202ENST00000425436 PPP6R3Q5H9R7 873 aaPredicted RBP15.96■□□□□ 0.15
SHOX2-202ENST00000425436 FSCBQ5H9T9 825 aa15.96■□□□□ 0.15
SHOX2-202ENST00000425436 MPP7Q5T2T1 576 aa15.96■□□□□ 0.15
SHOX2-202ENST00000425436 FSTL4Q6MZW2 842 aa15.96■□□□□ 0.15
SHOX2-202ENST00000425436 RWDD4Q6NW29 188 aaKnown RBP15.96■□□□□ 0.15
SHOX2-202ENST00000425436 PQLC3Q8N755 202 aa15.96■□□□□ 0.15
SHOX2-202ENST00000425436 ZBTB9Q96C00 473 aa15.96■□□□□ 0.15
SHOX2-202ENST00000425436 ARHGEF4Q9NR80 690 aa15.96■□□□□ 0.15
SHOX2-202ENST00000425436 BCCIPQ9P287 314 aaKnown RBP eCLIP15.96■□□□□ 0.15
SHOX2-202ENST00000425436 SAE1Q9UBE0 346 aaPredicted RBP15.96■□□□□ 0.15
SHOX2-202ENST00000425436 FBXO10Q9UK96 956 aa15.96■□□□□ 0.15
SHOX2-202ENST00000425436 DOCK4Q8N1I0 1966 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 DRGXA6NNA5 263 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 H0Y626 953 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 DLL1O00548 723 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 ALOX15BO15296 676 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 LRIG2O94898 1065 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 EGFP01133 1207 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 ZSCAN5DPP0CG00 497 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 PECAM1P16284 738 aaPredicted RBP15.95■□□□□ 0.14
SHOX2-202ENST00000425436 TSHRP16473 764 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 TARSP26639 723 aaKnown RBP15.95■□□□□ 0.14
SHOX2-202ENST00000425436 RPL22P35268 128 aaKnown RBP15.95■□□□□ 0.14
SHOX2-202ENST00000425436 MAGEA4P43358 317 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 DGKGP49619 791 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 ARL4CP56559 192 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 CBLBQ13191 982 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 C5orf22Q49AR2 442 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 TMEM196Q5HYL7 178 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 GRAMD4Q6IC98 578 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 MFN1Q8IWA4 741 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 PHTF2Q8N3S3 785 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 FAM71DQ8N9W8 422 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 EZH1Q92800 747 aaPredicted RBP15.95■□□□□ 0.14
SHOX2-202ENST00000425436 PBXIP1Q96AQ6 731 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 MSANTD3Q96H12 275 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 KCTD15Q96SI1 283 aaPredicted RBP15.95■□□□□ 0.14
SHOX2-202ENST00000425436 LTB4R2Q9NPC1 389 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 FARP1Q9Y4F1 1045 aaPredicted RBP15.95■□□□□ 0.14
SHOX2-202ENST00000425436 RAD54BQ9Y620 910 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 KIAA1549LQ6ZVL6 1849 aa15.95■□□□□ 0.14
SHOX2-202ENST00000425436 IGLV3-10A0A075B6K4 115 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 TBC1D3BA6NDS4 549 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 SRRM3A6NNA2 597 aaPredicted RBP15.94■□□□□ 0.14
SHOX2-202ENST00000425436 PI15O43692 258 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 LUC7L3O95232 432 aaKnown RBP15.94■□□□□ 0.14
SHOX2-202ENST00000425436 KAT7O95251 611 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 CD70P32970 193 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 HCAR3P49019 387 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 GRSF1Q12849 480 aaKnown RBP eCLIP15.94■□□□□ 0.14
SHOX2-202ENST00000425436 C1orf228Q6PIY5 440 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 TFAP2DQ7Z6R9 452 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 ZNF687Q8N1G0 1237 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 GLIS1Q8NBF1 620 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 TLCD1Q96CP7 247 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 CSPG4P5Q96PW8 444 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 LMAN1LQ9HAT1 526 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 NOVA2Q9UNW9 492 aaKnown RBP15.94■□□□□ 0.14
SHOX2-202ENST00000425436 A0A087WUV0 522 aaPredicted RBP15.94■□□□□ 0.14
SHOX2-202ENST00000425436 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.94■□□□□ 0.14
SHOX2-202ENST00000425436 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.94■□□□□ 0.14
SHOX2-202ENST00000425436 PRRT4C9JH25 899 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 K7EQS6 105 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 SHBGP04278 402 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 APODP05090 189 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 DCNP07585 359 aaKnown RBP15.94■□□□□ 0.14
SHOX2-202ENST00000425436 ETS1P14921 441 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 HLA-FP30511 346 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 EIF2DP41214 584 aaKnown RBP15.94■□□□□ 0.14
SHOX2-202ENST00000425436 SEC13P55735 322 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 NRG1Q02297 640 aaPredicted RBP15.94■□□□□ 0.14
SHOX2-202ENST00000425436 ZNF177Q13360 481 aaPredicted RBP15.94■□□□□ 0.14
SHOX2-202ENST00000425436 FZD5Q13467 585 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms