RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 SPATA20Q8TB22 786 aa4.99□□□□□ -1.61
LINC01040-201ENST00000425048 RSC1A1Q92681 617 aa4.99□□□□□ -1.61
LINC01040-201ENST00000425048 BICD1Q96G01 975 aa4.99□□□□□ -1.61
LINC01040-201ENST00000425048 SARGQ9BW04 601 aa4.99□□□□□ -1.61
LINC01040-201ENST00000425048 IFT27Q9BW83 186 aa4.99□□□□□ -1.61
LINC01040-201ENST00000425048 SLC39A10Q9ULF5 831 aa4.99□□□□□ -1.61
LINC01040-201ENST00000425048 A0A0U1RQJ8 604 aa4.98□□□□□ -1.61
LINC01040-201ENST00000425048 CLGNO14967 610 aa4.98□□□□□ -1.61
LINC01040-201ENST00000425048 KIF1CO43896 1103 aaKnown RBP4.98□□□□□ -1.61
LINC01040-201ENST00000425048 CLDN7O95471 211 aa4.98□□□□□ -1.61
LINC01040-201ENST00000425048 AMD1P17707 334 aa4.98□□□□□ -1.61
LINC01040-201ENST00000425048 ANOS1P23352 680 aa4.98□□□□□ -1.61
LINC01040-201ENST00000425048 LCE1FQ5T754 118 aa4.98□□□□□ -1.61
LINC01040-201ENST00000425048 KIAA1324Q6UXG2 1013 aaKnown RBP4.98□□□□□ -1.61
LINC01040-201ENST00000425048 C9orf139Q6ZV77 190 aa4.98□□□□□ -1.61
LINC01040-201ENST00000425048 PATL1Q86TB9 770 aaKnown RBP4.98□□□□□ -1.61
LINC01040-201ENST00000425048 RBFAQ8N0V3 343 aa4.98□□□□□ -1.61
LINC01040-201ENST00000425048 ZNF114Q8NC26 417 aa4.98□□□□□ -1.61
LINC01040-201ENST00000425048 RIPOR3Q96MK2 946 aa4.98□□□□□ -1.61
LINC01040-201ENST00000425048 OSGIN2Q9Y236 505 aa4.98□□□□□ -1.61
LINC01040-201ENST00000425048 NFS1Q9Y697 457 aa4.98□□□□□ -1.61
LINC01040-201ENST00000425048 KDM4EB2RXH2 506 aaPredicted RBP4.97□□□□□ -1.61
LINC01040-201ENST00000425048 PRAC2D3DTV9 90 aa4.97□□□□□ -1.61
LINC01040-201ENST00000425048 TULP2O00295 520 aa4.97□□□□□ -1.61
LINC01040-201ENST00000425048 PMM2O15305 246 aa4.97□□□□□ -1.61
LINC01040-201ENST00000425048 GM2AP17900 193 aa4.97□□□□□ -1.61
LINC01040-201ENST00000425048 CDK18Q07002 472 aa4.97□□□□□ -1.61
LINC01040-201ENST00000425048 DLG1Q12959 904 aa4.97□□□□□ -1.61
LINC01040-201ENST00000425048 HDAC1Q13547 482 aaPredicted RBP4.97□□□□□ -1.61
LINC01040-201ENST00000425048 CTTNQ14247 550 aaKnown RBP4.97□□□□□ -1.61
LINC01040-201ENST00000425048 TRIM60Q495X7 471 aa4.97□□□□□ -1.61
LINC01040-201ENST00000425048 TYW3Q6IPR3 259 aaKnown RBP4.97□□□□□ -1.61
LINC01040-201ENST00000425048 GATAD2AQ86YP4 633 aa4.97□□□□□ -1.61
LINC01040-201ENST00000425048 VPS52Q8N1B4 723 aa4.97□□□□□ -1.61
LINC01040-201ENST00000425048 TMEM18Q96B42 140 aa4.97□□□□□ -1.61
LINC01040-201ENST00000425048 CADM1Q9BY67 442 aaKnown RBP4.97□□□□□ -1.61
LINC01040-201ENST00000425048 STK33Q9BYT3 514 aa4.97□□□□□ -1.61
LINC01040-201ENST00000425048 EFCAB8A8MWE9 144 aa4.96□□□□□ -1.62
LINC01040-201ENST00000425048 GRM8O00222 908 aa4.96□□□□□ -1.62
LINC01040-201ENST00000425048 GLIPR1P48060 266 aa4.96□□□□□ -1.62
LINC01040-201ENST00000425048 VEGFCP49767 419 aa4.96□□□□□ -1.62
LINC01040-201ENST00000425048 CRIP2P52943 208 aaPredicted RBP4.96□□□□□ -1.62
LINC01040-201ENST00000425048 XKR9Q5GH70 373 aa4.96□□□□□ -1.62
LINC01040-201ENST00000425048 NCAPH2Q6IBW4 605 aa4.96□□□□□ -1.62
LINC01040-201ENST00000425048 KRTAP5-4Q6L8H1 288 aa4.96□□□□□ -1.62
LINC01040-201ENST00000425048 RNF144BQ7Z419 303 aa4.96□□□□□ -1.62
LINC01040-201ENST00000425048 C11orf96Q7Z7L8 435 aa4.96□□□□□ -1.62
LINC01040-201ENST00000425048 SMIM29Q86T20 159 aa4.96□□□□□ -1.62
LINC01040-201ENST00000425048 WDR5BQ86VZ2 330 aa4.96□□□□□ -1.62
LINC01040-201ENST00000425048 CD101Q93033 1021 aa4.96□□□□□ -1.62
LINC01040-201ENST00000425048 MUL1Q969V5 352 aa4.96□□□□□ -1.62
LINC01040-201ENST00000425048 C18orf8Q96DM3 657 aa4.96□□□□□ -1.62
LINC01040-201ENST00000425048 UHRF2Q96PU4 802 aa4.96□□□□□ -1.62
LINC01040-201ENST00000425048 SLC22A11Q9NSA0 550 aa4.96□□□□□ -1.62
LINC01040-201ENST00000425048 MMP24Q9Y5R2 645 aa4.96□□□□□ -1.62
LINC01040-201ENST00000425048 A0A0A0MQY5 61 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 DYTNA2CJ06 578 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 FAM90A18PA6NE21 464 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 FAM90A16PA6NEW6 464 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 DDTLA6NHG4 134 aaPredicted RBP4.95□□□□□ -1.62
LINC01040-201ENST00000425048 FAM90A9PA6NNJ1 464 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 FAM90A5PA8MXJ8 464 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 RASA4BC9J798 803 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 APAF1O14727 1248 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 RASA4O43374 803 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 DDAH2O95865 285 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 PAK4O96013 591 aaPredicted RBP4.95□□□□□ -1.62
LINC01040-201ENST00000425048 FAM90A15PP0C7V4 464 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 FAM90A14PP0C7W9 464 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 CDK7P50613 346 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 ADORA2A-AS1P86434 159 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 BTBD16Q32M84 506 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 PLEKHO1Q53GL0 409 aaPredicted RBP4.95□□□□□ -1.62
LINC01040-201ENST00000425048 RHBDF2Q6PJF5 856 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 TMC8Q8IU68 726 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 OR2C3Q8N628 320 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 NEK9Q8TD19 979 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 KCNJ9Q92806 393 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 LHPPQ9H008 270 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 LZTS1Q9Y250 596 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 PCDHGB2Q9Y5G2 931 aa4.95□□□□□ -1.62
LINC01040-201ENST00000425048 CKMT1AP12532 417 aa4.94□□□□□ -1.62
LINC01040-201ENST00000425048 DPP6P42658 865 aa4.94□□□□□ -1.62
LINC01040-201ENST00000425048 AADACL2Q6P093 401 aa4.94□□□□□ -1.62
LINC01040-201ENST00000425048 UNQ6126/PRO20091Q6UXV3 157 aa4.94□□□□□ -1.62
LINC01040-201ENST00000425048 NEK10Q6ZWH5 1172 aa4.94□□□□□ -1.62
LINC01040-201ENST00000425048 TRIM74Q86UV6 250 aa4.94□□□□□ -1.62
LINC01040-201ENST00000425048 TRIM73Q86UV7 250 aa4.94□□□□□ -1.62
LINC01040-201ENST00000425048 PGBD5Q8N414 524 aa4.94□□□□□ -1.62
LINC01040-201ENST00000425048 C2CD4CQ8TF44 421 aa4.94□□□□□ -1.62
LINC01040-201ENST00000425048 SORCS1Q8WY21 1168 aa4.94□□□□□ -1.62
LINC01040-201ENST00000425048 PGLYRP2Q96PD5 576 aa4.94□□□□□ -1.62
LINC01040-201ENST00000425048 TEFMQ96QE5 360 aaKnown RBP4.94□□□□□ -1.62
LINC01040-201ENST00000425048 EVA1AQ9H8M9 152 aa4.94□□□□□ -1.62
LINC01040-201ENST00000425048 CERS4Q9HA82 394 aa4.94□□□□□ -1.62
LINC01040-201ENST00000425048 WDR81Q562E7 1941 aa4.93□□□□□ -1.62
LINC01040-201ENST00000425048 NPIPB13A6NJU9 1138 aa4.93□□□□□ -1.62
LINC01040-201ENST00000425048 NPIPB5A8MRT5 1133 aa4.93□□□□□ -1.62
LINC01040-201ENST00000425048 NPIPB4C9JG80 1138 aa4.93□□□□□ -1.62
LINC01040-201ENST00000425048 ASNA1O43681 348 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms