RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 FAM47DPA6NHR8 397 aa20.73■□□□□ 0.91
GTF3A-202ENST00000419181 SLC7A4O43246 635 aa20.73■□□□□ 0.91
GTF3A-202ENST00000419181 PRPSAP2O60256 369 aa20.73■□□□□ 0.91
GTF3A-202ENST00000419181 SYPP08247 313 aa20.73■□□□□ 0.91
GTF3A-202ENST00000419181 CD27P26842 260 aa20.73■□□□□ 0.91
GTF3A-202ENST00000419181 CHRNA3P32297 505 aa20.73■□□□□ 0.91
GTF3A-202ENST00000419181 TPI1P60174 286 aa20.73■□□□□ 0.91
GTF3A-202ENST00000419181 CA9Q16790 459 aa20.73■□□□□ 0.91
GTF3A-202ENST00000419181 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.73■□□□□ 0.91
GTF3A-202ENST00000419181 UMODL1-AS1Q8N2C9 162 aa20.73■□□□□ 0.91
GTF3A-202ENST00000419181 PCDH20Q8N6Y1 951 aaKnown RBP20.73■□□□□ 0.91
GTF3A-202ENST00000419181 CHST14Q8NCH0 376 aa20.73■□□□□ 0.91
GTF3A-202ENST00000419181 TMIEQ8NEW7 156 aa20.73■□□□□ 0.91
GTF3A-202ENST00000419181 OR8K1Q8NGG5 319 aa20.73■□□□□ 0.91
GTF3A-202ENST00000419181 OR14C36Q8NHC7 312 aa20.73■□□□□ 0.91
GTF3A-202ENST00000419181 NCAPGQ9BPX3 1015 aa20.73■□□□□ 0.91
GTF3A-202ENST00000419181 GTPBP2Q9BX10 602 aaKnown RBP20.73■□□□□ 0.91
GTF3A-202ENST00000419181 DHX35Q9H5Z1 703 aaKnown RBP20.73■□□□□ 0.91
GTF3A-202ENST00000419181 FCF1Q9Y324 198 aaKnown RBP20.73■□□□□ 0.91
GTF3A-202ENST00000419181 PLXNA2O75051 1894 aa20.73■□□□□ 0.91
GTF3A-202ENST00000419181 PLK4O00444 970 aa20.72■□□□□ 0.91
GTF3A-202ENST00000419181 CYP1A2P05177 515 aa20.72■□□□□ 0.91
GTF3A-202ENST00000419181 PCK1P35558 622 aa20.72■□□□□ 0.91
GTF3A-202ENST00000419181 EIF4A3P38919 411 aaKnown RBP20.72■□□□□ 0.91
GTF3A-202ENST00000419181 ATXN3P54252 364 aaPredicted RBP20.72■□□□□ 0.91
GTF3A-202ENST00000419181 GEMIN4P57678 1058 aaKnown RBP20.72■□□□□ 0.91
GTF3A-202ENST00000419181 YBEYP58557 167 aaPredicted RBP20.72■□□□□ 0.91
GTF3A-202ENST00000419181 CNTN1Q12860 1018 aa20.72■□□□□ 0.91
GTF3A-202ENST00000419181 GRIK2Q13002 908 aa20.72■□□□□ 0.91
GTF3A-202ENST00000419181 ACAP1Q15027 740 aa20.72■□□□□ 0.91
GTF3A-202ENST00000419181 POM121L1PQ3SYA9 428 aa20.72■□□□□ 0.91
GTF3A-202ENST00000419181 CCDC122Q5T0U0 273 aa20.72■□□□□ 0.91
GTF3A-202ENST00000419181 AGBL4Q5VU57 503 aa20.72■□□□□ 0.91
GTF3A-202ENST00000419181 DPY19L3Q6ZPD9 716 aa20.72■□□□□ 0.91
GTF3A-202ENST00000419181 PSTKQ8IV42 348 aaKnown RBP20.72■□□□□ 0.91
GTF3A-202ENST00000419181 MINDY1Q8N5J2 469 aa20.72■□□□□ 0.91
GTF3A-202ENST00000419181 ISG20Q96AZ6 181 aaKnown RBP20.72■□□□□ 0.91
GTF3A-202ENST00000419181 HPCAL4Q9UM19 191 aa20.72■□□□□ 0.91
GTF3A-202ENST00000419181 KNL1Q8NG31 2342 aa20.72■□□□□ 0.91
GTF3A-202ENST00000419181 PLRG1O43660 514 aaKnown RBP20.71■□□□□ 0.91
GTF3A-202ENST00000419181 KDELR3O43731 214 aa20.71■□□□□ 0.91
GTF3A-202ENST00000419181 PRNPP04156 253 aa20.71■□□□□ 0.91
GTF3A-202ENST00000419181 RECQLP46063 649 aaPredicted RBP20.71■□□□□ 0.91
GTF3A-202ENST00000419181 CCR5P51681 352 aa20.71■□□□□ 0.91
GTF3A-202ENST00000419181 AFF3P51826 1226 aaKnown RBP20.71■□□□□ 0.91
GTF3A-202ENST00000419181 ASTE1Q2TB18 679 aaPredicted RBP20.71■□□□□ 0.91
GTF3A-202ENST00000419181 UAP1L1Q3KQV9 507 aa20.71■□□□□ 0.91
GTF3A-202ENST00000419181 PARP15Q460N3 678 aa20.71■□□□□ 0.91
GTF3A-202ENST00000419181 NIPA2Q8N8Q9 360 aa20.71■□□□□ 0.91
GTF3A-202ENST00000419181 OR2I1PQ8NGU4 316 aa20.71■□□□□ 0.91
GTF3A-202ENST00000419181 ARHGEF26Q96DR7 871 aa20.71■□□□□ 0.91
GTF3A-202ENST00000419181 KCTD15Q96SI1 283 aaPredicted RBP20.71■□□□□ 0.91
GTF3A-202ENST00000419181 NUP85Q9BW27 656 aa20.71■□□□□ 0.91
GTF3A-202ENST00000419181 ZDHHC5Q9C0B5 715 aa20.71■□□□□ 0.91
GTF3A-202ENST00000419181 KDM4CQ9H3R0 1056 aa20.71■□□□□ 0.91
GTF3A-202ENST00000419181 TM9SF3Q9HD45 589 aa20.71■□□□□ 0.91
GTF3A-202ENST00000419181 IL36AQ9UHA7 158 aa20.71■□□□□ 0.91
GTF3A-202ENST00000419181 WASF2Q9Y6W5 498 aa20.71■□□□□ 0.91
GTF3A-202ENST00000419181 A0A1W2PPC4 97 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 SSU72P8A0A1W2PR75 194 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 ZSCAN5CA6NGD5 496 aaPredicted RBP20.7■□□□□ 0.9
GTF3A-202ENST00000419181 RASA4BC9J798 803 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 RNF103O00237 685 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 EEF2KO00418 725 aaKnown RBP20.7■□□□□ 0.9
GTF3A-202ENST00000419181 KPNA3O00505 521 aaPredicted RBP20.7■□□□□ 0.9
GTF3A-202ENST00000419181 RASA4O43374 803 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 MFAP3LO75121 409 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 IL1R2P27930 398 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 BNC1Q01954 994 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 MAPK8IP2Q13387 824 aaPredicted RBP20.7■□□□□ 0.9
GTF3A-202ENST00000419181 PIGHQ14442 188 aaPredicted RBP20.7■□□□□ 0.9
GTF3A-202ENST00000419181 SLC18A3Q16572 532 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 CARD16Q5EG05 197 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 PIP5KL1Q5T9C9 394 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 SARM1Q6SZW1 724 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 RFX8Q6ZV50 586 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 PLPP6Q8IY26 295 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 GRIN3AQ8TCU5 1115 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 HMCESQ96FZ2 354 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 KLC2Q9H0B6 622 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 EBF2Q9HAK2 575 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 ABHD10Q9NUJ1 306 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 DNAAF2Q9NVR5 837 aaKnown RBP20.7■□□□□ 0.9
GTF3A-202ENST00000419181 DONSONQ9NYP3 566 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 ANAPC7Q9UJX3 599 aa20.7■□□□□ 0.9
GTF3A-202ENST00000419181 TPX2Q9ULW0 747 aaKnown RBP20.7■□□□□ 0.9
GTF3A-202ENST00000419181 LATO43561 262 aa20.69■□□□□ 0.9
GTF3A-202ENST00000419181 LEFTY1O75610 366 aa20.69■□□□□ 0.9
GTF3A-202ENST00000419181 GJB3O75712 270 aa20.69■□□□□ 0.9
GTF3A-202ENST00000419181 TPM1P09493 284 aa20.69■□□□□ 0.9
GTF3A-202ENST00000419181 TCF4P15884 667 aa20.69■□□□□ 0.9
GTF3A-202ENST00000419181 GRIA4P48058 902 aa20.69■□□□□ 0.9
GTF3A-202ENST00000419181 CSNK1EP49674 416 aaKnown RBP20.69■□□□□ 0.9
GTF3A-202ENST00000419181 CCNHP51946 323 aaPredicted RBP20.69■□□□□ 0.9
GTF3A-202ENST00000419181 PPP2CBP62714 309 aa20.69■□□□□ 0.9
GTF3A-202ENST00000419181 PPP2CAP67775 309 aa20.69■□□□□ 0.9
GTF3A-202ENST00000419181 SERINC3Q13530 473 aa20.69■□□□□ 0.9
GTF3A-202ENST00000419181 ARSIQ5FYB1 569 aa20.69■□□□□ 0.9
GTF3A-202ENST00000419181 LEKR1Q6ZMV7 388 aa20.69■□□□□ 0.9
GTF3A-202ENST00000419181 ARRDC3Q96B67 414 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms