RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 EIF3FO00303 357 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 HSPB6O14558 160 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 INSIG1O15503 277 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 CBX6O95503 412 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 THPOP40225 353 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 DPP6P42658 865 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 THBS3P49746 956 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 ME3Q16798 604 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 ZNF284Q2VY69 593 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 ANKRD45Q5TZF3 282 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 Q6ZTK2 550 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 HERVK_113Q902F9 699 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 STAMQ92783 540 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 TEFMQ96QE5 360 aaKnown RBP4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 REEP2Q9BRK0 252 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 RBM38Q9H0Z9 239 aaKnown RBP4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 GRHL1Q9NZI5 618 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 LUZP4Q9P127 313 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 GDAQ9Y2T3 454 aa4.78□□□□□ -1.64
HMGB1P49-201ENST00000418882 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 RPS10-NUDT3A0A1W2PQS6 291 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 TMEM247A6NEH6 219 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 SAC3D1A6NKF1 404 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 PEX12O00623 359 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 SPTLC2O15270 562 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 TPD52L2O43399 206 aaKnown RBP4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 SMAD6O43541 496 aaKnown RBP4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 RGS14O43566 566 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 LDB2O43679 373 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 ADAP00813 363 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 AVPR1AP37288 418 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 RFX2P48378 723 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 PAPOLAP51003 745 aaKnown RBP4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 CLCNKBP51801 687 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 GPS2Q13227 327 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 SLC12A1Q13621 1099 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 GPR18Q14330 331 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 HNF4GQ14541 408 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 DCAF12L2Q5VW00 463 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 ZNF517Q6ZMY9 492 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 ZDHHC17Q8IUH5 632 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 FAM185AQ8N0U4 392 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 ANKRD44Q8N8A2 993 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 NEXN-AS1Q8NBZ9 246 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 OR4N2Q8NGD1 307 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 NCSTNQ92542 709 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 ATOH1Q92858 354 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 MROH8Q9H579 483 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 KRCC1Q9NPI7 259 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 ATP8A2Q9NTI2 1148 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 GGA3Q9NZ52 723 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 SLC4A4Q9Y6R1 1079 aa4.77□□□□□ -1.65
HMGB1P49-201ENST00000418882 STRNO43815 780 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 PLA2G2AP14555 144 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 ARSBP15848 533 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 ABATP80404 500 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 MAPK7Q13164 816 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 SLC18A3Q16572 532 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 MAP3K21Q5TCX8 1036 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 TMEM268Q5VZI3 342 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 BBS12Q6ZW61 710 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 ZNF367Q7RTV3 350 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 SERPINA11Q86U17 422 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 LRRTM4Q86VH4 590 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 PRR26Q8N8Z3 221 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 LSM14AQ8ND56 463 aaKnown RBP4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 MIB2Q96AX9 1013 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 GCC1Q96CN9 775 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 UBXN10Q96LJ8 280 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 LHPPQ9H008 270 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 NOD2Q9HC29 1040 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 WDR6Q9NNW5 1121 aaKnown RBP4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 RIC8AQ9NPQ8 531 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 NCKIPSDQ9NZQ3 722 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 SEL1LQ9UBV2 794 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 DHDHQ9UQ10 334 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 PTGDR2Q9Y5Y4 395 aa4.76□□□□□ -1.65
HMGB1P49-201ENST00000418882 RNMTO43148 476 aaKnown RBP4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 CYP1A2P05177 515 aa4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 SNHG28P0DPA3 235 aa4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 GNLYP22749 145 aa4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 CNTFP26441 200 aa4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 SKIV2L2P42285 1042 aaKnown RBP4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 SLC18A2Q05940 514 aa4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 RAPGEF1Q13905 1077 aa4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 HEPHL1Q6MZM0 1159 aa4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 CYP26C1Q6V0L0 522 aa4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 TRILQ7L0X0 811 aa4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 CADM3Q8N126 398 aa4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 BICD2Q8TD16 824 aa4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 GPT2Q8TD30 523 aa4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 ADAMTS14Q8WXS8 1223 aa4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 ZNF479Q96JC4 524 aa4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 ZSCAN31Q96LW9 406 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 NPLQ9BXD5 320 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 TTYH1Q9H313 450 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 TTC12Q9H892 705 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGB1P49-201ENST00000418882 CLDN16Q9Y5I7 305 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms