RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 BUB1O43683 1085 aa19.01■□□□□ 0.63
PTCD3-204ENST00000418628 LMNAP02545 664 aaKnown RBP19.01■□□□□ 0.63
PTCD3-204ENST00000418628 BYSLQ13895 437 aaKnown RBP19.01■□□□□ 0.63
PTCD3-204ENST00000418628 PAFAH1B3Q15102 231 aaKnown RBP19.01■□□□□ 0.63
PTCD3-204ENST00000418628 CST6Q15828 149 aa19.01■□□□□ 0.63
PTCD3-204ENST00000418628 INO80DQ53TQ3 878 aaPredicted RBP19.01■□□□□ 0.63
PTCD3-204ENST00000418628 TMCO3Q6UWJ1 677 aa19.01■□□□□ 0.63
PTCD3-204ENST00000418628 ASCL5Q7RTU5 278 aa19.01■□□□□ 0.63
PTCD3-204ENST00000418628 KIAA1328Q86T90 577 aa19.01■□□□□ 0.63
PTCD3-204ENST00000418628 PGBD3Q8N328 593 aa19.01■□□□□ 0.63
PTCD3-204ENST00000418628 PABPC3Q9H361 631 aaKnown RBP19.01■□□□□ 0.63
PTCD3-204ENST00000418628 TRIM10Q9UDY6 481 aa19.01■□□□□ 0.63
PTCD3-204ENST00000418628 HPCAL4Q9UM19 191 aa19.01■□□□□ 0.63
PTCD3-204ENST00000418628 SCML1Q9UN30 329 aa19.01■□□□□ 0.63
PTCD3-204ENST00000418628 CYP8B1Q9UNU6 501 aa19.01■□□□□ 0.63
PTCD3-204ENST00000418628 FCF1Q9Y324 198 aaKnown RBP19.01■□□□□ 0.63
PTCD3-204ENST00000418628 GRID2IPA4D2P6 1211 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 ZBTB24O43167 697 aaPredicted RBP19■□□□□ 0.63
PTCD3-204ENST00000418628 SPOPO43791 374 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 MFSD11O43934 449 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 TMCC1O94876 653 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 CTSLP07711 333 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 SERPINB6P35237 376 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 MARCKSL1P49006 195 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 PAPOLAP51003 745 aaKnown RBP19■□□□□ 0.63
PTCD3-204ENST00000418628 SPDYCQ5MJ68 293 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 LAIR1Q6GTX8 287 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 ARHGAP36Q6ZRI8 547 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 ZNF662Q6ZS27 426 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 USP30Q70CQ3 517 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 CACUL1Q86Y37 369 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 MAP7D3Q8IWC1 876 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 TXLNBQ8N3L3 684 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 KCTD6Q8NC69 237 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 OR8D1Q8WZ84 308 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 LOXL4Q96JB6 756 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 CALN1Q9BXU9 219 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 DDX56Q9NY93 547 aaKnown RBP19■□□□□ 0.63
PTCD3-204ENST00000418628 WSB2Q9NYS7 404 aaPredicted RBP19■□□□□ 0.63
PTCD3-204ENST00000418628 SARDHQ9UL12 918 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 PPM1HQ9ULR3 514 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 CEP250Q9BV73 2442 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 KNL1Q8NG31 2342 aa19■□□□□ 0.63
PTCD3-204ENST00000418628 LRRD1A4D1F6 860 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 J3KR12 359 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 PEX11BO96011 259 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 ADH1BP00325 375 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 GSRP00390 522 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 CTNNA1P35221 906 aaKnown RBP18.99■□□□□ 0.63
PTCD3-204ENST00000418628 DRD3P35462 400 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 IL10RBQ08334 325 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 ACCSLQ4AC99 568 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 SLC9A4Q6AI14 798 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 DPY19L3Q6ZPD9 716 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 CEP68Q76N32 757 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 DAAM2Q86T65 1068 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 MMAAQ8IVH4 418 aaKnown RBP18.99■□□□□ 0.63
PTCD3-204ENST00000418628 KATNAL2Q8IYT4 538 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 AADATQ8N5Z0 425 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 PLD5Q8N7P1 536 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 NETO2Q8NC67 525 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 FAM122AQ96E09 287 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 RNF157Q96PX1 679 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 LHX3Q9UBR4 397 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 SERGEFQ9UGK8 458 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 INVSQ9Y283 1065 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 WASF2Q9Y6W5 498 aa18.99■□□□□ 0.63
PTCD3-204ENST00000418628 RNF103O00237 685 aa18.98■□□□□ 0.63
PTCD3-204ENST00000418628 MID1O15344 667 aa18.98■□□□□ 0.63
PTCD3-204ENST00000418628 RNASEH1O60930 286 aaKnown RBP18.98■□□□□ 0.63
PTCD3-204ENST00000418628 EPN2O95208 641 aa18.98■□□□□ 0.63
PTCD3-204ENST00000418628 DNTTP04053 509 aa18.98■□□□□ 0.63
PTCD3-204ENST00000418628 KRT1P04264 644 aa18.98■□□□□ 0.63
PTCD3-204ENST00000418628 C5AR1P21730 350 aa18.98■□□□□ 0.63
PTCD3-204ENST00000418628 CD6P30203 668 aa18.98■□□□□ 0.63
PTCD3-204ENST00000418628 METAP1P53582 386 aa18.98■□□□□ 0.63
PTCD3-204ENST00000418628 GALNT2Q10471 571 aa18.98■□□□□ 0.63
PTCD3-204ENST00000418628 KIF5AQ12840 1032 aa18.98■□□□□ 0.63
PTCD3-204ENST00000418628 TTC31Q49AM3 519 aaPredicted RBP18.98■□□□□ 0.63
PTCD3-204ENST00000418628 SLC36A4Q6YBV0 504 aa18.98■□□□□ 0.63
PTCD3-204ENST00000418628 PRR23BQ6ZRT6 265 aa18.98■□□□□ 0.63
PTCD3-204ENST00000418628 CHST14Q8NCH0 376 aa18.98■□□□□ 0.63
PTCD3-204ENST00000418628 TMIEQ8NEW7 156 aa18.98■□□□□ 0.63
PTCD3-204ENST00000418628 KRT35Q92764 455 aa18.98■□□□□ 0.63
PTCD3-204ENST00000418628 CCDC114Q96M63 670 aa18.98■□□□□ 0.63
PTCD3-204ENST00000418628 TNKS2Q9H2K2 1166 aa18.98■□□□□ 0.63
PTCD3-204ENST00000418628 FZD4Q9ULV1 537 aa18.98■□□□□ 0.63
PTCD3-204ENST00000418628 MAFKO60675 156 aa18.97■□□□□ 0.63
PTCD3-204ENST00000418628 CTNNA2P26232 953 aa18.97■□□□□ 0.63
PTCD3-204ENST00000418628 OXTRP30559 389 aa18.97■□□□□ 0.63
PTCD3-204ENST00000418628 CHRNA3P32297 505 aa18.97■□□□□ 0.63
PTCD3-204ENST00000418628 CDKN2BP42772 138 aa18.97■□□□□ 0.63
PTCD3-204ENST00000418628 PSMD8P48556 350 aa18.97■□□□□ 0.63
PTCD3-204ENST00000418628 CCNHP51946 323 aaPredicted RBP18.97■□□□□ 0.63
PTCD3-204ENST00000418628 CYTH1Q15438 398 aa18.97■□□□□ 0.63
PTCD3-204ENST00000418628 CARD16Q5EG05 197 aa18.97■□□□□ 0.63
PTCD3-204ENST00000418628 PEAR1Q5VY43 1037 aaPredicted RBP18.97■□□□□ 0.63
PTCD3-204ENST00000418628 MFSD7Q6UXD7 560 aa18.97■□□□□ 0.63
PTCD3-204ENST00000418628 LEKR1Q6ZMV7 388 aa18.97■□□□□ 0.63
PTCD3-204ENST00000418628 DSG4Q86SJ6 1040 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms