RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 TRUB2O95900 331 aaKnown RBP14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 C8BP07358 591 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 CNTFP26441 200 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 PGGT1BP53609 377 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 IRF9Q00978 393 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 RHDQ02161 417 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 PLCL1Q15111 1095 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 GLRA4Q5JXX5 417 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 SWSAP1Q6NVH7 229 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 PQLC3Q8N755 202 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 Q8N9G6 341 aaPredicted RBP14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 PCYOX1LQ8NBM8 494 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 CMASQ8NFW8 434 aaPredicted RBP14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 ACMSDQ8TDX5 336 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 SREK1Q8WXA9 508 aaKnown RBP14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 TFAP2CQ92754 450 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 TMEM143Q96AN5 459 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 ASB9Q96DX5 294 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 ADI1Q9BV57 179 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 PCDH12Q9NPG4 1184 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 SNX15Q9NRS6 342 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 GMPR2Q9P2T1 348 aaKnown RBP14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 GABBR1Q9UBS5 961 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 ZNF112Q9UJU3 913 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 UBIAD1Q9Y5Z9 338 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 PGK2P07205 417 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 GARTP22102 1010 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 GRIA3P42263 894 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 TPTEP56180 551 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 PHKG1Q16816 387 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 FAM47CQ5HY64 1035 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 CATSPERGQ6ZRH7 1159 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 PLD5Q8N7P1 536 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 TNIP2Q8NFZ5 429 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 TRUB1Q8WWH5 349 aaKnown RBP14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 SLCO4A1Q96BD0 722 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 LRRC39Q96DD0 335 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 ANKRD36BP1Q96IX9 119 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 CPXM1Q96SM3 734 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 TEX13BQ9BXU2 312 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 NXF1Q9UBU9 619 aaKnown RBP14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 CYTH4Q9UIA0 394 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 SLC27A5Q9Y2P5 690 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 IQCA1LA6NCM1 817 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 ZNF701M0R085 212 aaPredicted RBP14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 CLOCKO15516 846 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 TRIM13O60858 407 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 RGS20O76081 388 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 LSM8O95777 96 aaKnown RBP14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 HOXD11P31277 338 aaPredicted RBP14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 SOX11P35716 441 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 NKX2-5P52952 324 aaPredicted RBP14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 MYL6P60660 151 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 RPS3AP61247 264 aaKnown RBP14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 TSPY1Q01534 308 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 FAM102AQ5T9C2 384 aaPredicted RBP14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 ZNF534Q76KX8 674 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 ZBTB33Q86T24 672 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 ZC3H15Q8WU90 426 aaKnown RBP14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 CANT1Q8WVQ1 401 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 UTP6Q9NYH9 597 aaKnown RBP14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 AP4E1Q9UPM8 1137 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 CDYLQ9Y232 598 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 DYNC1LI2O43237 492 aaPredicted RBP14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 DCKP27707 260 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 GLRBP48167 497 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 MLLT10P55197 1068 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 GPR162Q16538 588 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 NEPROQ6NW34 567 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 CAPSLQ8WWF8 208 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 PBXIP1Q96AQ6 731 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 CNDP1Q96KN2 507 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 PPP1R16BQ96T49 567 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 CEP41Q9BYV8 373 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 MOCS1Q9NZB8 636 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 CPQQ9Y646 472 aa14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 COPG1Q9Y678 874 aaKnown RBP14.92□□□□□ -0.02
NCKIPSD-204ENST00000416649 PRPSAP2O60256 369 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 ARSAP15289 507 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 TFEBP19484 476 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 MATN1P21941 496 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 MGAT1P26572 445 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 MAPK11Q15759 364 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 ARL13AQ5H913 290 aaPredicted RBP14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 STXBP5Q5T5C0 1151 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 TTC30AQ86WT1 665 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 DCLK2Q8N568 766 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 NAT16Q8N8M0 369 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 ZNF420Q8TAQ5 688 aaPredicted RBP14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 SLC39A3Q9BRY0 314 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 MSTO1Q9BUK6 570 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 C1orf50Q9BV19 199 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 UNKQ9C0B0 810 aaKnown RBP14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 MUC3BQ9H195 1237 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 NGRNQ9NPE2 291 aaKnown RBP14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 ADARB2Q9NS39 739 aaKnown RBP14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 VPS28Q9UK41 221 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 PCDHGC3Q9UN70 934 aa14.91□□□□□ -0.02
NCKIPSD-204ENST00000416649 ATP11BQ9Y2G3 1177 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms