RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CLEC16AQ2KHT3 1053 aa17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 PIP5KL1Q5T9C9 394 aa17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 TMPRSS7Q7RTY8 843 aa17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 PHF13Q86YI8 300 aaPredicted RBP17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 CHST14Q8NCH0 376 aa17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 JOSD2Q8TAC2 188 aa17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 CENPIQ92674 756 aaPredicted RBP17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 ARRDC3Q96B67 414 aa17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 SELENOOQ9BVL4 669 aa17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 FTSJ1Q9UET6 329 aa17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 IL36AQ9UHA7 158 aa17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 GOLGA4Q13439 2230 aaKnown RBP17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 PLXNB3Q9ULL4 1909 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 GOLGA8CPA6NN73 597 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 RHOQP17081 205 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 MAPKAPK2P49137 400 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 SERPINH1P50454 418 aaKnown RBP17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 TAS2R38P59533 333 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 SHBQ15464 509 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 RAB6CQ53S08 254 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 ARSIQ5FYB1 569 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 CCDC183Q5T5S1 534 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 MANEALQ5VSG8 457 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 RWDD4Q6NW29 188 aaKnown RBP17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 DPY19L3Q6ZPD9 716 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 ERN2Q76MJ5 926 aaKnown RBP17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 GATAD2AQ86YP4 633 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 DRC7Q8IY82 874 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 GALNT15Q8N3T1 639 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 PCDH20Q8N6Y1 951 aaKnown RBP17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 SAP25Q8TEE9 199 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 PPP1R16AQ96I34 528 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 RAB6CQ9H0N0 254 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 TNKS2Q9H2K2 1166 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 PTPRBP23467 1997 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 IGF2RP11717 2491 aa17.96■□□□□ 0.47
PDLIM2-208ENST00000416159 KNTC1P50748 2209 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 SIGLEC16A6NMB1 481 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 SRRM3A6NNA2 597 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 ZNF821O75541 412 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 GJB6O95452 261 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 CCDC172P0C7W6 258 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 GPD1P21695 349 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 RFC1P35251 1148 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 ARF5P84085 180 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 SCAPQ12770 1279 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 NCAPHQ15003 741 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 CARD16Q5EG05 197 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 WDR59Q6PJI9 974 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 C3orf20Q8ND61 904 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 FAM172AQ8WUF8 416 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 NTAN1Q96AB6 310 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 KLHDC7BQ96G42 594 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 AGPAT1Q99943 283 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 HEPHQ9BQS7 1158 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 HDAC8Q9BY41 377 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 SEPT11Q9NVA2 429 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 TMEM248Q9NWD8 314 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 WASF2Q9Y6W5 498 aa17.95■□□□□ 0.46
PDLIM2-208ENST00000416159 A0A1W2PQU0 124 aa17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 LEFTY1O75610 366 aa17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 LDOC1O95751 146 aaPredicted RBP17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 PLEKP08567 350 aaPredicted RBP17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 EPHA8P29322 1005 aaPredicted RBP17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 DNA2P51530 1060 aa17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 HDAC4P56524 1084 aa17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 GEMIN4P57678 1058 aaKnown RBP17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 APTXQ7Z2E3 356 aaKnown RBP17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 NLRP14Q86W24 1093 aa17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 HORMAD1Q86X24 394 aa17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 SPATS2Q86XZ4 545 aaKnown RBP17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 PLPP6Q8IY26 295 aa17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 GRIN3AQ8TCU5 1115 aa17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 ARHGEF2Q92974 986 aaKnown RBP17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 ISG20Q96AZ6 181 aaKnown RBP17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 TBC1D31Q96DN5 1066 aa17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 MAGEH1Q9H213 219 aa17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 HSD3B7Q9H2F3 369 aa17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 PCDHGA1Q9Y5H4 931 aa17.94■□□□□ 0.46
PDLIM2-208ENST00000416159 CHD5Q8TDI0 1954 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 COL5A1P20908 1838 aaPredicted RBP17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 FAM72CH0Y354 149 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 ENC1O14682 589 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 SLC31A1O15431 190 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 LRIG2O94898 1065 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 PCDH8O95206 1070 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 CAPNS1P04632 268 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 FERP16591 822 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 ACVRL1P37023 503 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 NEK3P51956 506 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 C1QBPQ07021 282 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 BNIP3Q12983 259 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 FAM72AQ5TYM5 149 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 FAM72DQ6L9T8 149 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 MON1BQ7L1V2 547 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 SLFN11Q7Z7L1 901 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 FAM72BQ86X60 149 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 CCDC185Q8N715 623 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 TMEM145Q8NBT3 493 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 CNDP2Q96KP4 475 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms