RNA–Protein interactions for RNA: ENST00000414306.5

SBDS-202, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-202ENST00000414306 ATXN7L2Q5T6C5 722 aaPredicted RBP18.04■□□□□ 0.48
SBDS-202ENST00000414306 ZC3H18Q86VM9 953 aaKnown RBP18.04■□□□□ 0.48
SBDS-202ENST00000414306 STK40Q8N2I9 435 aa18.04■□□□□ 0.48
SBDS-202ENST00000414306 PGBD3Q8N328 593 aa18.04■□□□□ 0.48
SBDS-202ENST00000414306 PTPRN2Q92932 1015 aa18.04■□□□□ 0.48
SBDS-202ENST00000414306 IER2Q9BTL4 223 aa18.04■□□□□ 0.48
SBDS-202ENST00000414306 BCCIPQ9P287 314 aaKnown RBP eCLIP18.04■□□□□ 0.48
SBDS-202ENST00000414306 ZKSCAN5Q9Y2L8 839 aa18.04■□□□□ 0.48
SBDS-202ENST00000414306 CEP104O60308 925 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 TJP3O95049 919 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 MX2P20592 715 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 DGKEP52429 567 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 GEMIN4P57678 1058 aaKnown RBP18.03■□□□□ 0.48
SBDS-202ENST00000414306 CSTF1Q05048 431 aaKnown RBP18.03■□□□□ 0.48
SBDS-202ENST00000414306 CYTH1Q15438 398 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 C9orf64Q5T6V5 341 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 MAML2Q8IZL2 1156 aaPredicted RBP18.03■□□□□ 0.48
SBDS-202ENST00000414306 RYBPQ8N488 228 aaPredicted RBP18.03■□□□□ 0.48
SBDS-202ENST00000414306 CARD9Q9H257 536 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 C10orf88Q9H8K7 445 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 POLMQ9NP87 494 aaPredicted RBP18.03■□□□□ 0.48
SBDS-202ENST00000414306 KCND1Q9NSA2 647 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 SUN2Q9UH99 717 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 ANKRD36A6QL64 1941 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 EML5Q05BV3 1969 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 K7ESF4 209 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 ZNF821O75541 412 aaPredicted RBP18.03■□□□□ 0.48
SBDS-202ENST00000414306 CLCN6P51797 869 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 RHOAP61586 193 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 OTUD4Q01804 1114 aaKnown RBP18.03■□□□□ 0.48
SBDS-202ENST00000414306 SLC20A2Q08357 652 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 SLC10A7Q0GE19 358 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 HS1BP3Q53T59 392 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 KIAA1324Q6UXG2 1013 aaKnown RBP18.03■□□□□ 0.48
SBDS-202ENST00000414306 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.03■□□□□ 0.48
SBDS-202ENST00000414306 KDM1BQ8NB78 822 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 CHST14Q8NCH0 376 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 MDGA1Q8NFP4 955 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 ACTL9Q8TC94 416 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 OLFM3Q96PB7 478 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 CINPQ9BW66 212 aaPredicted RBP18.03■□□□□ 0.48
SBDS-202ENST00000414306 CEP41Q9BYV8 373 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 TPSD1Q9BZJ3 242 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 MKRN2Q9H000 416 aaKnown RBP18.03■□□□□ 0.48
SBDS-202ENST00000414306 PRDM16Q9HAZ2 1276 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 PRMT8Q9NR22 394 aaPredicted RBP18.03■□□□□ 0.48
SBDS-202ENST00000414306 SEPT10Q9P0V9 454 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 R3HDM2Q9Y2K5 976 aaKnown RBP18.03■□□□□ 0.48
SBDS-202ENST00000414306 TTLL3Q9Y4R7 772 aa18.03■□□□□ 0.48
SBDS-202ENST00000414306 APOC4-APOC2K7ER74 178 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 KCNK1O00180 336 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 PPP1R12AO14974 1030 aaPredicted RBP18.02■□□□□ 0.47
SBDS-202ENST00000414306 GJB3O75712 270 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 PEX11BO96011 259 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 APOC2P02655 101 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 GABRG2P18507 467 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 NDUFV2P19404 249 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 GKP32189 559 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 COPAP53621 1224 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 CAMK2GQ13555 558 aaPredicted RBP18.02■□□□□ 0.47
SBDS-202ENST00000414306 LBRQ14739 615 aaKnown RBP18.02■□□□□ 0.47
SBDS-202ENST00000414306 PDK1Q15118 436 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 POM121L1PQ3SYA9 428 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 TMCO4Q5TGY1 634 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 SLC13A5Q86YT5 568 aaPredicted RBP18.02■□□□□ 0.47
SBDS-202ENST00000414306 CCDC13Q8IYE1 715 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 TSEN2Q8NCE0 465 aaKnown RBP18.02■□□□□ 0.47
SBDS-202ENST00000414306 OR2A12Q8NGT7 310 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 GRIN3AQ8TCU5 1115 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 NSMCE1Q8WV22 266 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 HDAC11Q96DB2 347 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 CD248Q9HCU0 757 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 LHX3Q9UBR4 397 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 EFR3BQ9Y2G0 817 aa18.02■□□□□ 0.47
SBDS-202ENST00000414306 TTC24A2A3L6 582 aaPredicted RBP18.01■□□□□ 0.47
SBDS-202ENST00000414306 H7C0C1 242 aa18.01■□□□□ 0.47
SBDS-202ENST00000414306 FANCGO15287 622 aa18.01■□□□□ 0.47
SBDS-202ENST00000414306 APBB3O95704 486 aa18.01■□□□□ 0.47
SBDS-202ENST00000414306 RECQLP46063 649 aaPredicted RBP18.01■□□□□ 0.47
SBDS-202ENST00000414306 RGRP47804 291 aa18.01■□□□□ 0.47
SBDS-202ENST00000414306 ATP5OP48047 213 aa18.01■□□□□ 0.47
SBDS-202ENST00000414306 NR2C2P49116 596 aa18.01■□□□□ 0.47
SBDS-202ENST00000414306 VASPP50552 380 aaPredicted RBP18.01■□□□□ 0.47
SBDS-202ENST00000414306 PPIDQ08752 370 aaKnown RBP18.01■□□□□ 0.47
SBDS-202ENST00000414306 KLF1Q13351 362 aaPredicted RBP18.01■□□□□ 0.47
SBDS-202ENST00000414306 ZNF235Q14590 738 aa18.01■□□□□ 0.47
SBDS-202ENST00000414306 ANGPT1Q15389 498 aa18.01■□□□□ 0.47
SBDS-202ENST00000414306 INO80DQ53TQ3 878 aaPredicted RBP18.01■□□□□ 0.47
SBDS-202ENST00000414306 DPY19L3Q6ZPD9 716 aa18.01■□□□□ 0.47
SBDS-202ENST00000414306 TMPRSS6Q8IU80 811 aa18.01■□□□□ 0.47
SBDS-202ENST00000414306 MMAAQ8IVH4 418 aaKnown RBP18.01■□□□□ 0.47
SBDS-202ENST00000414306 PCDH20Q8N6Y1 951 aaKnown RBP18.01■□□□□ 0.47
SBDS-202ENST00000414306 OR2T3Q8NH03 318 aa18.01■□□□□ 0.47
SBDS-202ENST00000414306 COG1Q8WTW3 980 aa18.01■□□□□ 0.47
SBDS-202ENST00000414306 ZNF419Q96HQ0 510 aaPredicted RBP18.01■□□□□ 0.47
SBDS-202ENST00000414306 MS4A14Q96JA4 679 aa18.01■□□□□ 0.47
SBDS-202ENST00000414306 C16orf45Q96MC5 204 aaPredicted RBP18.01■□□□□ 0.47
SBDS-202ENST00000414306 CEP44Q9C0F1 390 aa18.01■□□□□ 0.47
SBDS-202ENST00000414306 CD93Q9NPY3 652 aa18.01■□□□□ 0.47
SBDS-202ENST00000414306 SMARCAL1Q9NZC9 954 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms