RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	MAFK	O60675	156 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	ALDH1A2	O94788	518 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	TMCC1	O94876	653 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	ATP1A1	P05023	1023 aa	Known RBP	13.4	□□□□□ -0.26
SF1-206	ENST00000413725	PECAM1	P16284	738 aa	Predicted RBP	13.4	□□□□□ -0.26
SF1-206	ENST00000413725	CCNC	P24863	283 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	RECQL	P46063	649 aa	Predicted RBP	13.4	□□□□□ -0.26
SF1-206	ENST00000413725	NUBP1	P53384	320 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	SATB1	Q01826	763 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	ZNF33A	Q06730	810 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	ADCY2	Q08462	1091 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	CAMK2G	Q13555	558 aa	Predicted RBP	13.4	□□□□□ -0.26
SF1-206	ENST00000413725	LEKR1	Q6ZMV7	388 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	C1orf210	Q8IVY1	113 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	CCDC13	Q8IYE1	715 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	TSTD1	Q8NFU3	115 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	FRS2	Q8WU20	508 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	ISG20	Q96AZ6	181 aa	Known RBP	13.4	□□□□□ -0.26
SF1-206	ENST00000413725	HAUS1	Q96CS2	278 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	PBK	Q96KB5	322 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	OLFM3	Q96PB7	478 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	TSGA13	Q96PP4	275 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	NAPG	Q99747	312 aa	Predicted RBP	13.4	□□□□□ -0.26
SF1-206	ENST00000413725	CINP	Q9BW66	212 aa	Predicted RBP	13.4	□□□□□ -0.26
SF1-206	ENST00000413725	HAUS2	Q9NVX0	235 aa		13.4	□□□□□ -0.26
SF1-206	ENST00000413725	FCF1	Q9Y324	198 aa	Known RBP	13.4	□□□□□ -0.26
SF1-206	ENST00000413725	THADA	Q6YHU6	1953 aa		13.4	□□□□□ -0.27
SF1-206	ENST00000413725	TCRBV21S2A2	A0A5A6	115 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	CTAGE9	A4FU28	777 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	SMAD6	O43541	496 aa	Known RBP	13.39	□□□□□ -0.27
SF1-206	ENST00000413725	CEP104	O60308	925 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	NEBL	O76041	1014 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	PAPSS2	O95340	614 aa	Predicted RBP	13.39	□□□□□ -0.27
SF1-206	ENST00000413725	APBB3	O95704	486 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	CD160	O95971	181 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	TCP1	P17987	556 aa	Known RBP	13.39	□□□□□ -0.27
SF1-206	ENST00000413725	CXCR5	P32302	372 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	RHOA	P61586	193 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	SNRPD1	P62314	119 aa	Known RBP	13.39	□□□□□ -0.27
SF1-206	ENST00000413725	PPID	Q08752	370 aa	Known RBP	13.39	□□□□□ -0.27
SF1-206	ENST00000413725	AP1B1	Q10567	949 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	XRCC4	Q13426	336 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	ELAVL3	Q14576	367 aa	Known RBP	13.39	□□□□□ -0.27
SF1-206	ENST00000413725	ZNF235	Q14590	738 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	LBR	Q14739	615 aa	Known RBP	13.39	□□□□□ -0.27
SF1-206	ENST00000413725	NOMO1	Q15155	1222 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	KIAA1211L	Q6NV74	962 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	TMEM92	Q6UXU6	159 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725		Q6ZVU0	165 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	DSG4	Q86SJ6	1040 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.39	□□□□□ -0.27
SF1-206	ENST00000413725	OR2T3	Q8NH03	318 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	ACTL9	Q8TC94	416 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	TFB1M	Q8WVM0	346 aa	Known RBP	13.39	□□□□□ -0.27
SF1-206	ENST00000413725	MAIP1	Q8WWC4	291 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	FATE1	Q969F0	183 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	HHIP	Q96QV1	700 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	WDR24	Q96S15	920 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	FERMT1	Q9BQL6	677 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	HERPUD2	Q9BSE4	406 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	LRFN3	Q9BTN0	628 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	PRSS16	Q9NQE7	514 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	PRMT8	Q9NR22	394 aa	Predicted RBP	13.39	□□□□□ -0.27
SF1-206	ENST00000413725	SAE1	Q9UBE0	346 aa	Predicted RBP	13.39	□□□□□ -0.27
SF1-206	ENST00000413725	SEPT3	Q9UH03	358 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	SNX12	Q9UMY4	172 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725	ACTL7A	Q9Y615	435 aa		13.39	□□□□□ -0.27
SF1-206	ENST00000413725		A0A1W2PQF6	199 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	HACD1	B0YJ81	288 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725		H7C0C1	242 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	MCF2L	O15068	1137 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	MATN3	O15232	486 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	ALOX15B	O15296	676 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	BNIP3L	O60238	219 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	RNASEH1	O60930	286 aa	Known RBP	13.38	□□□□□ -0.27
SF1-206	ENST00000413725	SIN3B	O75182	1162 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	ZNF189	O75820	626 aa	Predicted RBP	13.38	□□□□□ -0.27
SF1-206	ENST00000413725	IGSF6	O95976	241 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	GSR	P00390	522 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	VAV1	P15498	845 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	COL9A1	P20849	921 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	HSPA9	P38646	679 aa	Known RBP	13.38	□□□□□ -0.27
SF1-206	ENST00000413725	ATP5O	P48047	213 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	RENBP	P51606	427 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	ETF1	P62495	437 aa	Known RBP	13.38	□□□□□ -0.27
SF1-206	ENST00000413725	OTUD4	Q01804	1114 aa	Known RBP	13.38	□□□□□ -0.27
SF1-206	ENST00000413725	KLF1	Q13351	362 aa	Predicted RBP	13.38	□□□□□ -0.27
SF1-206	ENST00000413725	HNRNPD	Q14103	355 aa	Known RBP	13.38	□□□□□ -0.27
SF1-206	ENST00000413725	C9orf64	Q5T6V5	341 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	MARC1	Q5VT66	337 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	ZC3H18	Q86VM9	953 aa	Known RBP	13.38	□□□□□ -0.27
SF1-206	ENST00000413725	PLPP6	Q8IY26	295 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	RYBP	Q8N488	228 aa	Predicted RBP	13.38	□□□□□ -0.27
SF1-206	ENST00000413725	CAMKK1	Q8N5S9	505 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	OR8D1	Q8WZ84	308 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	PTPRN2	Q92932	1015 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	GDAP1L1	Q96MZ0	367 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	OSBPL9	Q96SU4	736 aa		13.38	□□□□□ -0.27
SF1-206	ENST00000413725	NAP1L3	Q99457	506 aa	Predicted RBP	13.38	□□□□□ -0.27
SF1-206	ENST00000413725	LGMN	Q99538	433 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms