RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 C1QTNF3-AMACRE9PGA6 284 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 H3BRJ5 948 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 KHNYNO15037 678 aaKnown RBP10.27□□□□□ -0.77
TMEM248-202ENST00000413593 DAPK3O43293 454 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 GDF9O60383 454 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 SEMA4FO95754 770 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 CTSLP07711 333 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 MAOBP27338 520 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 CHRNA3P32297 505 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 DRD3P35462 400 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 ARL4AP40617 200 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 RECQLP46063 649 aaPredicted RBP10.27□□□□□ -0.77
TMEM248-202ENST00000413593 NDST2P52849 883 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 SERINC3Q13530 473 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 AASDHQ4L235 1098 aaPredicted RBP10.27□□□□□ -0.77
TMEM248-202ENST00000413593 TRIM61Q5EBN2 209 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 SYCP2LQ5T4T6 812 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 DCAF12L1Q5VU92 463 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 FAM46CQ5VWP2 391 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 AFMIDQ63HM1 303 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 LEKR1Q6ZMV7 388 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 DPY19L3Q6ZPD9 716 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 POLNQ7Z5Q5 900 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 HDDC3Q8N4P3 179 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 NPWQ8N729 165 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 C12orf50Q8NA57 414 aaPredicted RBP10.27□□□□□ -0.77
TMEM248-202ENST00000413593 CHST14Q8NCH0 376 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 TMIEQ8NEW7 156 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 SLC35G2Q8TBE7 412 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 PIP4K2CQ8TBX8 421 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 DNASE2BQ8WZ79 361 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 HSPH1Q92598 858 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 FAM131CQ96AQ9 280 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 ISG20Q96AZ6 181 aaKnown RBP10.27□□□□□ -0.77
TMEM248-202ENST00000413593 CELF6Q96J87 481 aaKnown RBP10.27□□□□□ -0.77
TMEM248-202ENST00000413593 PANX2Q96RD6 677 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 OMDQ99983 421 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 ANP32EQ9BTT0 268 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 NEUROG2Q9H2A3 272 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 RXFP3Q9NSD7 469 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 EVLQ9UI08 416 aaPredicted RBP10.27□□□□□ -0.77
TMEM248-202ENST00000413593 INTUQ9ULD6 942 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 WASF2Q9Y6W5 498 aa10.27□□□□□ -0.77
TMEM248-202ENST00000413593 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.26□□□□□ -0.77
TMEM248-202ENST00000413593 LNP1A1A4G5 178 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 C10orf142B7Z368 130 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 PLK4O00444 970 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 BUB1O43683 1085 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 MTA2O94776 668 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 LCA5LO95447 670 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 PRNPP04156 253 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 FECHP22830 423 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 MAN1A1P33908 653 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 SSR1P43307 286 aaKnown RBP10.26□□□□□ -0.77
TMEM248-202ENST00000413593 DNA2P51530 1060 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 TAS2R40P59535 323 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 IRX4P78413 519 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 CNTN1Q12860 1018 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 TCEAL1Q15170 157 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 HADHQ16836 314 aaKnown RBP10.26□□□□□ -0.77
TMEM248-202ENST00000413593 DUOXA1Q1HG43 343 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 POM121L1PQ3SYA9 428 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 INO80DQ53TQ3 878 aaPredicted RBP10.26□□□□□ -0.77
TMEM248-202ENST00000413593 CARD16Q5EG05 197 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 SLC23A3Q6PIS1 610 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.26□□□□□ -0.77
TMEM248-202ENST00000413593 RABEPKQ7Z6M1 372 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 ZNF354CQ86Y25 554 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 ARHGAP12Q8IWW6 846 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 RHOT2Q8IXI1 618 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 PLPP6Q8IY26 295 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 CCDC170Q8IYT3 715 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 RGL4Q8IZJ4 473 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 CEP76Q8TAP6 659 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 FAM71BQ8TC56 605 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 GRIN3AQ8TCU5 1115 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 NETO1Q8TDF5 533 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 CASKIN2Q8WXE0 1202 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 RFFLQ8WZ73 363 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 TSC1Q92574 1164 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 BIRC7Q96CA5 298 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 RMDN1Q96DB5 314 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 CSPG4P5Q96PW8 444 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 TM6SF2Q9BZW4 377 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 SLC39A8Q9C0K1 460 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 PDFQ9HBH1 243 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 PCDH18Q9HCL0 1135 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 SUSD2Q9UGT4 822 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.26□□□□□ -0.77
TMEM248-202ENST00000413593 PLXND1Q9Y4D7 1925 aa10.26□□□□□ -0.77
TMEM248-202ENST00000413593 SPAG17Q6Q759 2223 aa10.25□□□□□ -0.77
TMEM248-202ENST00000413593 FAM47DPA6NHR8 397 aa10.25□□□□□ -0.77
TMEM248-202ENST00000413593 ARHGAP42A6NI28 874 aa10.25□□□□□ -0.77
TMEM248-202ENST00000413593 LRRC72A6NJI9 287 aa10.25□□□□□ -0.77
TMEM248-202ENST00000413593 TMEM110-MUSTN1A8MSY1 372 aa10.25□□□□□ -0.77
TMEM248-202ENST00000413593 J3KR12 359 aa10.25□□□□□ -0.77
TMEM248-202ENST00000413593 RNF103O00237 685 aa10.25□□□□□ -0.77
TMEM248-202ENST00000413593 KPNA3O00505 521 aaPredicted RBP10.25□□□□□ -0.77
TMEM248-202ENST00000413593 SLC7A4O43246 635 aa10.25□□□□□ -0.77
TMEM248-202ENST00000413593 PRAMEF11O60813 436 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms