RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 A0A1B0GVT2 93 aa16.02■□□□□ 0.16
MCF2L-211ENST00000413354 K7ERQ8 282 aa16.02■□□□□ 0.16
MCF2L-211ENST00000413354 CBFA2T2O43439 604 aa16.02■□□□□ 0.16
MCF2L-211ENST00000413354 SMAD6O43541 496 aaKnown RBP16.02■□□□□ 0.16
MCF2L-211ENST00000413354 CREB3O43889 395 aa16.02■□□□□ 0.16
MCF2L-211ENST00000413354 GJB3O75712 270 aa16.02■□□□□ 0.16
MCF2L-211ENST00000413354 SERPING1P05155 500 aa16.02■□□□□ 0.16
MCF2L-211ENST00000413354 SKILP12757 684 aa16.02■□□□□ 0.16
MCF2L-211ENST00000413354 ACVRL1P37023 503 aa16.02■□□□□ 0.16
MCF2L-211ENST00000413354 CSNK1EP49674 416 aaKnown RBP16.02■□□□□ 0.16
MCF2L-211ENST00000413354 ARF5P84085 180 aa16.02■□□□□ 0.16
MCF2L-211ENST00000413354 OGDHQ02218 1023 aa16.02■□□□□ 0.16
MCF2L-211ENST00000413354 ZNF252P-AS1Q0IIN9 211 aa16.02■□□□□ 0.16
MCF2L-211ENST00000413354 N4BP2L1Q5TBK1 243 aaPredicted RBP16.02■□□□□ 0.16
MCF2L-211ENST00000413354 AGBL4Q5VU57 503 aa16.02■□□□□ 0.16
MCF2L-211ENST00000413354 DEFB124Q8NES8 71 aa16.02■□□□□ 0.16
MCF2L-211ENST00000413354 ISG20Q96AZ6 181 aaKnown RBP16.02■□□□□ 0.16
MCF2L-211ENST00000413354 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.02■□□□□ 0.16
MCF2L-211ENST00000413354 PREBQ9HCU5 417 aa16.02■□□□□ 0.16
MCF2L-211ENST00000413354 IL36AQ9UHA7 158 aa16.02■□□□□ 0.16
MCF2L-211ENST00000413354 SARDHQ9UL12 918 aa16.02■□□□□ 0.16
MCF2L-211ENST00000413354 AP4E1Q9UPM8 1137 aa16.02■□□□□ 0.16
MCF2L-211ENST00000413354 DOCK9Q9BZ29 2069 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 TRPM6Q9BX84 2022 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 TBC1D3DA0A087WVF3 549 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 TBC1D3IA0A087WXS9 549 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 TBC1D3EA0A087X179 549 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 TBC1D3KA0A087X1G2 549 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 TBC1D3FA6NER0 549 aaPredicted RBP16.01■□□□□ 0.15
MCF2L-211ENST00000413354 TMEM191CA6NGB0 347 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 WASH4PA8MWX3 477 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 C10orf142B7Z368 130 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 TBC1D3LB9A6J9 549 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 KPNA3O00505 521 aaPredicted RBP16.01■□□□□ 0.15
MCF2L-211ENST00000413354 TBC1D3HP0C7X1 549 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 C21orf59P57076 290 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 YBEYP58557 167 aaPredicted RBP16.01■□□□□ 0.15
MCF2L-211ENST00000413354 TPI1P60174 286 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 CNTN1Q12860 1018 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 TRIM14Q14142 442 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 SLC45A4Q5BKX6 768 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 HGSNATQ68CP4 663 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 TBC1D3GQ6DHY5 549 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 TBC1D3CQ6IPX1 549 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 PIP4P1Q86T03 277 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 PRPF39Q86UA1 669 aaKnown RBP16.01■□□□□ 0.15
MCF2L-211ENST00000413354 TRIM69Q86WT6 500 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 ZNF354CQ86Y25 554 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 PLPP6Q8IY26 295 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 TBC1D3Q8IZP1 549 aaPredicted RBP16.01■□□□□ 0.15
MCF2L-211ENST00000413354 PYROXD2Q8N2H3 581 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 OR2I1PQ8NGU4 316 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 ORAI3Q9BRQ5 295 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 ISCUQ9H1K1 167 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 TNKS2Q9H2K2 1166 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 TSPY26PQ9H489 355 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 GAREM1Q9H706 876 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 NDFIP2Q9NV92 336 aa16.01■□□□□ 0.15
MCF2L-211ENST00000413354 LATO43561 262 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 PRPSAP2O60256 369 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 DFNA5O60443 496 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 CTSLP07711 333 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 CD59P13987 128 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 DNA2P51530 1060 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 ZNF135P52742 658 aaPredicted RBP16■□□□□ 0.15
MCF2L-211ENST00000413354 METAP1P53582 386 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 ACAP1Q15027 740 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 HLA-BQ31612 363 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 POM121L1PQ3SYA9 428 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 PARP15Q460N3 678 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 CARD16Q5EG05 197 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 DPY19L3Q6ZPD9 716 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 PSTKQ8IV42 348 aaKnown RBP16■□□□□ 0.15
MCF2L-211ENST00000413354 CHST14Q8NCH0 376 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 GRIN3AQ8TCU5 1115 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 CPLX3Q8WVH0 158 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 CASKIN2Q8WXE0 1202 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 SLC6A18Q96N87 628 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 HEPHQ9BQS7 1158 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 MAGEB5Q9BZ81 275 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 XPO4Q9C0E2 1151 aaKnown RBP16■□□□□ 0.15
MCF2L-211ENST00000413354 AASDHPPTQ9NRN7 309 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 MYO1AQ9UBC5 1043 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 DMTF1Q9Y222 760 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 ANKRD6Q9Y2G4 727 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 FCF1Q9Y324 198 aaKnown RBP16■□□□□ 0.15
MCF2L-211ENST00000413354 PCDHGB2Q9Y5G2 931 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 SLCO1B1Q9Y6L6 691 aa16■□□□□ 0.15
MCF2L-211ENST00000413354 EEF2KO00418 725 aaKnown RBP15.99■□□□□ 0.15
MCF2L-211ENST00000413354 PLK4O00444 970 aa15.99■□□□□ 0.15
MCF2L-211ENST00000413354 GIPC1O14908 333 aa15.99■□□□□ 0.15
MCF2L-211ENST00000413354 VILLO15195 856 aa15.99■□□□□ 0.15
MCF2L-211ENST00000413354 KDELR3O43731 214 aa15.99■□□□□ 0.15
MCF2L-211ENST00000413354 LEFTY1O75610 366 aa15.99■□□□□ 0.15
MCF2L-211ENST00000413354 GSRP00390 522 aa15.99■□□□□ 0.15
MCF2L-211ENST00000413354 GYPCP04921 128 aa15.99■□□□□ 0.15
MCF2L-211ENST00000413354 PMLP29590 882 aa15.99■□□□□ 0.15
MCF2L-211ENST00000413354 CCNHP51946 323 aaPredicted RBP15.99■□□□□ 0.15
MCF2L-211ENST00000413354 SNRPD1P62314 119 aaKnown RBP15.99■□□□□ 0.15
MCF2L-211ENST00000413354 PPP2CBP62714 309 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms