RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 RPL22P35268 128 aaKnown RBP20.58■□□□□ 0.89
PTPA-208ENST00000411917 TNFRSF4P43489 277 aa20.58■□□□□ 0.89
PTPA-208ENST00000411917 TERF1P54274 439 aa20.58■□□□□ 0.89
PTPA-208ENST00000411917 GEN1Q17RS7 908 aa20.58■□□□□ 0.89
PTPA-208ENST00000411917 ZNF354CQ86Y25 554 aa20.58■□□□□ 0.89
PTPA-208ENST00000411917 GPR161Q8N6U8 529 aaKnown RBP20.58■□□□□ 0.89
PTPA-208ENST00000411917 CNTD1Q8N815 330 aa20.58■□□□□ 0.89
PTPA-208ENST00000411917 NETO2Q8NC67 525 aa20.58■□□□□ 0.89
PTPA-208ENST00000411917 MYRIPQ8NFW9 859 aa20.58■□□□□ 0.89
PTPA-208ENST00000411917 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.58■□□□□ 0.89
PTPA-208ENST00000411917 FCRL5Q96RD9 977 aa20.58■□□□□ 0.89
PTPA-208ENST00000411917 GBA3Q9H227 469 aa20.58■□□□□ 0.89
PTPA-208ENST00000411917 PRDM6Q9NQX0 595 aa20.58■□□□□ 0.89
PTPA-208ENST00000411917 EIF2B3Q9NR50 452 aaKnown RBP20.58■□□□□ 0.89
PTPA-208ENST00000411917 VPS45Q9NRW7 570 aa20.58■□□□□ 0.89
PTPA-208ENST00000411917 RBM22Q9NW64 420 aaKnown RBP eCLIP20.58■□□□□ 0.89
PTPA-208ENST00000411917 ELOVL2Q9NXB9 296 aa20.58■□□□□ 0.89
PTPA-208ENST00000411917 WHRNQ9P202 907 aa20.58■□□□□ 0.89
PTPA-208ENST00000411917 SLC25A13Q9UJS0 675 aa20.58■□□□□ 0.89
PTPA-208ENST00000411917 SORCS3Q9UPU3 1222 aa20.58■□□□□ 0.89
PTPA-208ENST00000411917 SNAP91O60641 907 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 HEXIM1O94992 359 aaKnown RBP20.57■□□□□ 0.88
PTPA-208ENST00000411917 KAT7O95251 611 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 JCHAINP01591 159 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 APODP05090 189 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 MCM3P25205 808 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 MAPK8P45983 427 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 CDK16Q00536 496 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 SLC10A7Q0GE19 358 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 CBLBQ13191 982 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 SEMA5AQ13591 1074 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 TEX35Q5T0J7 233 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 TMEM215Q68D42 235 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 ARHGEF18Q6ZSZ5 1173 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 HOOK3Q86VS8 718 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 SH2D3CQ8N5H7 860 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 CCDC33Q8N5R6 958 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 NAT16Q8N8M0 369 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 UCMAQ8WVF2 138 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 NUP205Q92621 2012 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 TADA1Q96BN2 335 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 ZNF419Q96HQ0 510 aaPredicted RBP20.57■□□□□ 0.88
PTPA-208ENST00000411917 P2RY13Q9BPV8 354 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 POLR1EQ9GZS1 481 aaKnown RBP20.57■□□□□ 0.88
PTPA-208ENST00000411917 SLC25A51Q9H1U9 297 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 GDF3Q9NR23 364 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 FAM114A2Q9NRY5 505 aa20.57■□□□□ 0.88
PTPA-208ENST00000411917 KLHL8Q9P2G9 620 aaPredicted RBP20.57■□□□□ 0.88
PTPA-208ENST00000411917 PRUNE2Q8WUY3 3088 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 GOLGA6CA6NDK9 693 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 GOLGA6BA6NDN3 693 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 PSMD3O43242 534 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 TMCC1O94876 653 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 GOLGA6DP0CG33 693 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 BMP1P13497 986 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 HNRNPLP14866 589 aaKnown RBP eCLIP20.56■□□□□ 0.88
PTPA-208ENST00000411917 ITIH2P19823 946 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 CR2P20023 1033 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 DRD1P21728 446 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 GLDCP23378 1020 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 SLC6A11P48066 632 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 CAV1Q03135 178 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 CUL1Q13616 776 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 ZNF235Q14590 738 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 WDR93Q6P2C0 686 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 PID1Q7Z2X4 250 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 PCDH20Q8N6Y1 951 aaKnown RBP20.56■□□□□ 0.88
PTPA-208ENST00000411917 GLIS1Q8NBF1 620 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 SNF8Q96H20 258 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 ASB2Q96Q27 587 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 CINPQ9BW66 212 aaPredicted RBP20.56■□□□□ 0.88
PTPA-208ENST00000411917 FRMD8Q9BZ67 464 aaPredicted RBP20.56■□□□□ 0.88
PTPA-208ENST00000411917 C10orf88Q9H8K7 445 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 GLOD4Q9HC38 313 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 GOLGA6AQ9NYA3 693 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 ASIC3Q9UHC3 531 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 ERVW-1Q9UQF0 538 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 PIAS3Q9Y6X2 628 aa20.56■□□□□ 0.88
PTPA-208ENST00000411917 MAN2B1O00754 1011 aa20.55■□□□□ 0.88
PTPA-208ENST00000411917 NEBLO76041 1014 aa20.55■□□□□ 0.88
PTPA-208ENST00000411917 SEC31AO94979 1220 aaKnown RBP20.55■□□□□ 0.88
PTPA-208ENST00000411917 GSRP00390 522 aa20.55■□□□□ 0.88
PTPA-208ENST00000411917 HLA-DQB2P05538 268 aa20.55■□□□□ 0.88
PTPA-208ENST00000411917 ASGR2P07307 311 aa20.55■□□□□ 0.88
PTPA-208ENST00000411917 TPSB2P20231 275 aa20.55■□□□□ 0.88
PTPA-208ENST00000411917 CD68P34810 354 aaPredicted RBP20.55■□□□□ 0.88
PTPA-208ENST00000411917 NNMTP40261 264 aa20.55■□□□□ 0.88
PTPA-208ENST00000411917 PRKCQQ04759 706 aa20.55■□□□□ 0.88
PTPA-208ENST00000411917 ENPP2Q13822 863 aa20.55■□□□□ 0.88
PTPA-208ENST00000411917 CYTH1Q15438 398 aa20.55■□□□□ 0.88
PTPA-208ENST00000411917 TPSAB1Q15661 275 aa20.55■□□□□ 0.88
PTPA-208ENST00000411917 TMEM196Q5HYL7 178 aa20.55■□□□□ 0.88
PTPA-208ENST00000411917 IFT20Q8IY31 132 aa20.55■□□□□ 0.88
PTPA-208ENST00000411917 UBALD2Q8IYN6 164 aa20.55■□□□□ 0.88
PTPA-208ENST00000411917 ST13P5Q8NFI4 369 aaPredicted RBP20.55■□□□□ 0.88
PTPA-208ENST00000411917 CCDC110Q8TBZ0 833 aa20.55■□□□□ 0.88
PTPA-208ENST00000411917 IMP4Q96G21 291 aaKnown RBP20.55■□□□□ 0.88
PTPA-208ENST00000411917 MRGPRX3Q96LB0 322 aa20.55■□□□□ 0.88
PTPA-208ENST00000411917 PHACTR1Q9C0D0 580 aa20.55■□□□□ 0.88
PTPA-208ENST00000411917 SEPT10Q9P0V9 454 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms