RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 SLC7A4O43246 635 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 PLRG1O43660 514 aaKnown RBP18.08■□□□□ 0.48
LSM5-204ENST00000409909 CER1O95813 267 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 FTLP02792 175 aaPredicted RBP18.08■□□□□ 0.48
LSM5-204ENST00000409909 WNT1P04628 370 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 GZMAP12544 262 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 L1CAMP32004 1257 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 TAS2R38P59533 333 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 RACK1P63244 317 aaKnown RBP18.08■□□□□ 0.48
LSM5-204ENST00000409909 SHC2P98077 582 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 SLC20A2Q08357 652 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 KLHL30Q0D2K2 578 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 TEAD4Q15561 434 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 PPP1R2P3Q6NXS1 205 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 DPY19L3Q6ZPD9 716 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 TMC6Q7Z403 805 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 ARFGAP1Q8N6T3 406 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 TMIEQ8NEW7 156 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 ARRDC3Q96B67 414 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 NOL6Q9H6R4 1146 aaKnown RBP18.08■□□□□ 0.48
LSM5-204ENST00000409909 PARVAQ9NVD7 372 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 ARHGAP20Q9P2F6 1191 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 WASF3Q9UPY6 502 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 FARP1Q9Y4F1 1045 aaPredicted RBP18.08■□□□□ 0.48
LSM5-204ENST00000409909 ASPMQ8IZT6 3477 aa18.08■□□□□ 0.48
LSM5-204ENST00000409909 TMEM191CA6NGB0 347 aa18.07■□□□□ 0.48
LSM5-204ENST00000409909 LATO43561 262 aa18.07■□□□□ 0.48
LSM5-204ENST00000409909 ZNF883P0CG24 379 aa18.07■□□□□ 0.48
LSM5-204ENST00000409909 CTSKP43235 329 aa18.07■□□□□ 0.48
LSM5-204ENST00000409909 UBASH3AP57075 661 aa18.07■□□□□ 0.48
LSM5-204ENST00000409909 TPM4P67936 248 aa18.07■□□□□ 0.48
LSM5-204ENST00000409909 ARSIQ5FYB1 569 aa18.07■□□□□ 0.48
LSM5-204ENST00000409909 EFHC2Q5JST6 749 aa18.07■□□□□ 0.48
LSM5-204ENST00000409909 PIP5KL1Q5T9C9 394 aa18.07■□□□□ 0.48
LSM5-204ENST00000409909 NAXDQ8IW45 347 aa18.07■□□□□ 0.48
LSM5-204ENST00000409909 CCDC114Q96M63 670 aa18.07■□□□□ 0.48
LSM5-204ENST00000409909 TRIM7Q9C029 511 aa18.07■□□□□ 0.48
LSM5-204ENST00000409909 CEP44Q9C0F1 390 aa18.07■□□□□ 0.48
LSM5-204ENST00000409909 MAGEH1Q9H213 219 aa18.07■□□□□ 0.48
LSM5-204ENST00000409909 KDM4CQ9H3R0 1056 aa18.07■□□□□ 0.48
LSM5-204ENST00000409909 TM7SF3Q9NS93 570 aa18.07■□□□□ 0.48
LSM5-204ENST00000409909 ANGPTL2Q9UKU9 493 aa18.07■□□□□ 0.48
LSM5-204ENST00000409909 FCF1Q9Y324 198 aaKnown RBP18.07■□□□□ 0.48
LSM5-204ENST00000409909 WASF2Q9Y6W5 498 aa18.07■□□□□ 0.48
LSM5-204ENST00000409909 MAP1BP46821 2468 aaKnown RBP18.06■□□□□ 0.48
LSM5-204ENST00000409909 A0A1W2PR77 199 aa18.06■□□□□ 0.48
LSM5-204ENST00000409909 KPNA3O00505 521 aaPredicted RBP18.06■□□□□ 0.48
LSM5-204ENST00000409909 VILLO15195 856 aa18.06■□□□□ 0.48
LSM5-204ENST00000409909 TOP3BO95985 862 aaKnown RBP18.06■□□□□ 0.48
LSM5-204ENST00000409909 PTMSP20962 102 aa18.06■□□□□ 0.48
LSM5-204ENST00000409909 EPHB2P29323 1055 aa18.06■□□□□ 0.48
LSM5-204ENST00000409909 ETFBP38117 255 aa18.06■□□□□ 0.48
LSM5-204ENST00000409909 SIM1P81133 766 aaPredicted RBP18.06■□□□□ 0.48
LSM5-204ENST00000409909 HGSNATQ68CP4 663 aa18.06■□□□□ 0.48
LSM5-204ENST00000409909 LEKR1Q6ZMV7 388 aa18.06■□□□□ 0.48
LSM5-204ENST00000409909 DBX2Q6ZNG2 339 aa18.06■□□□□ 0.48
LSM5-204ENST00000409909 PCDH20Q8N6Y1 951 aaKnown RBP18.06■□□□□ 0.48
LSM5-204ENST00000409909 RTL3Q8N8U3 475 aaKnown RBP18.06■□□□□ 0.48
LSM5-204ENST00000409909 GRIN3AQ8TCU5 1115 aa18.06■□□□□ 0.48
LSM5-204ENST00000409909 IL36AQ9UHA7 158 aa18.06■□□□□ 0.48
LSM5-204ENST00000409909 CXorf51AA0A1B0GTR3 108 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 A0A1W2PQJ5 194 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 H0Y8X5 98 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 CREB3O43889 395 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 RAMP2O60895 175 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 CBFA2T3O75081 653 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 LEFTY1O75610 366 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 PRNPP04156 253 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 PSMA2P25787 234 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 MAT2AP31153 395 aaKnown RBP18.05■□□□□ 0.48
LSM5-204ENST00000409909 DNA2P51530 1060 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 AIF1P55008 147 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 FOXC1Q12948 553 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 POLD3Q15054 466 aaPredicted RBP18.05■□□□□ 0.48
LSM5-204ENST00000409909 CARD16Q5EG05 197 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 ADAT2Q7Z6V5 191 aaKnown RBP18.05■□□□□ 0.48
LSM5-204ENST00000409909 CPLX3Q8WVH0 158 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 VOPP1Q96AW1 172 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 SERAC1Q96JX3 654 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 KLC2Q9H0B6 622 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 ISCUQ9H1K1 167 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 AASDHPPTQ9NRN7 309 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 GPATCH2LQ9NWQ4 482 aa18.05■□□□□ 0.48
LSM5-204ENST00000409909 CNOT8Q9UFF9 292 aaKnown RBP18.05■□□□□ 0.48
LSM5-204ENST00000409909 GOLGA6L19H0YKK7 550 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 KDELR3O43731 214 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 SPINK2P20155 84 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 CD38P28907 300 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 RECQLP46063 649 aaPredicted RBP18.04■□□□□ 0.48
LSM5-204ENST00000409909 CCNHP51946 323 aaPredicted RBP18.04■□□□□ 0.48
LSM5-204ENST00000409909 C21orf59P57076 290 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 TRIP6Q15654 476 aaKnown RBP18.04■□□□□ 0.48
LSM5-204ENST00000409909 CA9Q16790 459 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 ZNF423Q2M1K9 1284 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 PRAMEF14Q5SWL7 426 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 TRIM69Q86WT6 500 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 SYN2Q92777 582 aaPredicted RBP18.04■□□□□ 0.48
LSM5-204ENST00000409909 ISG20Q96AZ6 181 aaKnown RBP18.04■□□□□ 0.48
LSM5-204ENST00000409909 PEBP4Q96S96 227 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 EPAS1Q99814 870 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms