RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 NEBLO76041 1014 aa21■□□□□ 0.95
C4orf48-202ENST00000409860 CD160O95971 181 aa21■□□□□ 0.95
C4orf48-202ENST00000409860 EPHX1P07099 455 aa21■□□□□ 0.95
C4orf48-202ENST00000409860 RBP3P10745 1247 aa21■□□□□ 0.95
C4orf48-202ENST00000409860 PRKCHP24723 683 aa21■□□□□ 0.95
C4orf48-202ENST00000409860 WASP42768 502 aa21■□□□□ 0.95
C4orf48-202ENST00000409860 LBRQ14739 615 aaKnown RBP21■□□□□ 0.95
C4orf48-202ENST00000409860 STARD3Q14849 445 aa21■□□□□ 0.95
C4orf48-202ENST00000409860 PRKD1Q15139 912 aaPredicted RBP21■□□□□ 0.95
C4orf48-202ENST00000409860 DLG2Q15700 870 aa21■□□□□ 0.95
C4orf48-202ENST00000409860 HNRNPA1L2Q32P51 320 aaKnown RBP21■□□□□ 0.95
C4orf48-202ENST00000409860 SLC45A4Q5BKX6 768 aa21■□□□□ 0.95
C4orf48-202ENST00000409860 C22orf39Q6P5X5 142 aa21■□□□□ 0.95
C4orf48-202ENST00000409860 BMP8AQ7Z5Y6 402 aa21■□□□□ 0.95
C4orf48-202ENST00000409860 PCDH20Q8N6Y1 951 aaKnown RBP21■□□□□ 0.95
C4orf48-202ENST00000409860 LRRN4Q8WUT4 740 aa21■□□□□ 0.95
C4orf48-202ENST00000409860 CAPZA3Q96KX2 299 aa21■□□□□ 0.95
C4orf48-202ENST00000409860 FAM118BQ9BPY3 351 aa21■□□□□ 0.95
C4orf48-202ENST00000409860 CINPQ9BW66 212 aaPredicted RBP21■□□□□ 0.95
C4orf48-202ENST00000409860 HAUS2Q9NVX0 235 aa21■□□□□ 0.95
C4orf48-202ENST00000409860 SEPT3Q9UH03 358 aa21■□□□□ 0.95
C4orf48-202ENST00000409860 MMP17Q9ULZ9 603 aa21■□□□□ 0.95
C4orf48-202ENST00000409860 VCANP13611 3396 aa21■□□□□ 0.95
C4orf48-202ENST00000409860 CHD5Q8TDI0 1954 aa20.99■□□□□ 0.95
C4orf48-202ENST00000409860 EDDM13A0A1B0GTR0 161 aa20.99■□□□□ 0.95
C4orf48-202ENST00000409860 MTSS1O43312 755 aa20.99■□□□□ 0.95
C4orf48-202ENST00000409860 SMAD6O43541 496 aaKnown RBP20.99■□□□□ 0.95
C4orf48-202ENST00000409860 SYNCRIPO60506 623 aaKnown RBP20.99■□□□□ 0.95
C4orf48-202ENST00000409860 HLA-EP13747 358 aa20.99■□□□□ 0.95
C4orf48-202ENST00000409860 HOXB2P14652 356 aa20.99■□□□□ 0.95
C4orf48-202ENST00000409860 RENBPP51606 427 aa20.99■□□□□ 0.95
C4orf48-202ENST00000409860 HNRNPDQ14103 355 aaKnown RBP20.99■□□□□ 0.95
C4orf48-202ENST00000409860 ZNF235Q14590 738 aa20.99■□□□□ 0.95
C4orf48-202ENST00000409860 MARC1Q5VT66 337 aa20.99■□□□□ 0.95
C4orf48-202ENST00000409860 DARS2Q6PI48 645 aaKnown RBP20.99■□□□□ 0.95
C4orf48-202ENST00000409860 MAML1Q92585 1016 aa20.99■□□□□ 0.95
C4orf48-202ENST00000409860 ISG20Q96AZ6 181 aaKnown RBP20.99■□□□□ 0.95
C4orf48-202ENST00000409860 CCDC114Q96M63 670 aa20.99■□□□□ 0.95
C4orf48-202ENST00000409860 HOMER3Q9NSC5 361 aa20.99■□□□□ 0.95
C4orf48-202ENST00000409860 RNF14Q9UBS8 474 aa20.99■□□□□ 0.95
C4orf48-202ENST00000409860 GOLGA6L10A0A0M3HER8 536 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 WASH3PC4AMC7 463 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 SGK1O00141 431 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 ADAM23O75077 832 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 PEX11BO96011 259 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 PAFAH1B1P43034 410 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 MMP13P45452 471 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 RECQLP46063 649 aaPredicted RBP20.98■□□□□ 0.95
C4orf48-202ENST00000409860 RHOAP61586 193 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 SLC10A7Q0GE19 358 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 GAS6Q14393 721 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 CYTH1Q15438 398 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 SIX1Q15475 284 aaPredicted RBP20.98■□□□□ 0.95
C4orf48-202ENST00000409860 HEATR6Q6AI08 1181 aaKnown RBP20.98■□□□□ 0.95
C4orf48-202ENST00000409860 PKN3Q6P5Z2 889 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 B4GALNT4Q76KP1 1039 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 SPEM1Q8N4L4 309 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 FBXL6Q8N531 539 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 ZNF366Q8N895 744 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 KIF18AQ8NI77 898 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 SLC35B2Q8TB61 432 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 FRS2Q8WU20 508 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 C1orf54Q8WWF1 131 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 ATG4AQ8WYN0 398 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 SMARCAL1Q9NZC9 954 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 SEPT10Q9P0V9 454 aa20.98■□□□□ 0.95
C4orf48-202ENST00000409860 NUP205Q92621 2012 aa20.97■□□□□ 0.95
C4orf48-202ENST00000409860 TARSL2A2RTX5 802 aaKnown RBP20.97■□□□□ 0.95
C4orf48-202ENST00000409860 ESPNB1AK53 854 aa20.97■□□□□ 0.95
C4orf48-202ENST00000409860 KCNK1O00180 336 aa20.97■□□□□ 0.95
C4orf48-202ENST00000409860 PI15O43692 258 aa20.97■□□□□ 0.95
C4orf48-202ENST00000409860 LIASO43766 372 aa20.97■□□□□ 0.95
C4orf48-202ENST00000409860 CCNB1P14635 433 aa20.97■□□□□ 0.95
C4orf48-202ENST00000409860 VAV1P15498 845 aa20.97■□□□□ 0.95
C4orf48-202ENST00000409860 HSPA9P38646 679 aaKnown RBP20.97■□□□□ 0.95
C4orf48-202ENST00000409860 SNRPD1P62314 119 aaKnown RBP20.97■□□□□ 0.95
C4orf48-202ENST00000409860 IFI35P80217 286 aaPredicted RBP20.97■□□□□ 0.95
C4orf48-202ENST00000409860 CCNG2Q16589 344 aa20.97■□□□□ 0.95
C4orf48-202ENST00000409860 Q6ZVU0 165 aa20.97■□□□□ 0.95
C4orf48-202ENST00000409860 SYT13Q7L8C5 426 aa20.97■□□□□ 0.95
C4orf48-202ENST00000409860 CREG2Q8IUH2 290 aa20.97■□□□□ 0.95
C4orf48-202ENST00000409860 HTR3CQ8WXA8 447 aa20.97■□□□□ 0.95
C4orf48-202ENST00000409860 TNKS2Q9H2K2 1166 aa20.97■□□□□ 0.95
C4orf48-202ENST00000409860 RBM22Q9NW64 420 aaKnown RBP eCLIP20.97■□□□□ 0.95
C4orf48-202ENST00000409860 DLGAP2Q9P1A6 1054 aa20.97■□□□□ 0.95
C4orf48-202ENST00000409860 DNPEPQ9ULA0 475 aa20.97■□□□□ 0.95
C4orf48-202ENST00000409860 FARP1Q9Y4F1 1045 aaPredicted RBP20.97■□□□□ 0.95
C4orf48-202ENST00000409860 BCLAF3A2AJT9 711 aaKnown RBP20.96■□□□□ 0.95
C4orf48-202ENST00000409860 CFAP69A5D8W1 941 aa20.96■□□□□ 0.95
C4orf48-202ENST00000409860 KRIT1O00522 736 aa20.96■□□□□ 0.95
C4orf48-202ENST00000409860 BNIP3LO60238 219 aa20.96■□□□□ 0.95
C4orf48-202ENST00000409860 STK10O94804 968 aaKnown RBP20.96■□□□□ 0.95
C4orf48-202ENST00000409860 IGSF6O95976 241 aa20.96■□□□□ 0.95
C4orf48-202ENST00000409860 GSRP00390 522 aa20.96■□□□□ 0.95
C4orf48-202ENST00000409860 JCHAINP01591 159 aa20.96■□□□□ 0.95
C4orf48-202ENST00000409860 RBL1P28749 1068 aa20.96■□□□□ 0.95
C4orf48-202ENST00000409860 MTAPQ13126 283 aa20.96■□□□□ 0.95
C4orf48-202ENST00000409860 BYSLQ13895 437 aaKnown RBP20.96■□□□□ 0.95
C4orf48-202ENST00000409860 TEX26Q8N6G2 289 aa20.96■□□□□ 0.95
C4orf48-202ENST00000409860 PTPRN2Q92932 1015 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms