RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 CSTF1Q05048 431 aaKnown RBP18.48■□□□□ 0.55
PAX3-208ENST00000409828 TIGD7Q6NT04 549 aaPredicted RBP18.48■□□□□ 0.55
PAX3-208ENST00000409828 C22orf39Q6P5X5 142 aa18.48■□□□□ 0.55
PAX3-208ENST00000409828 LINGO4Q6UY18 593 aa18.48■□□□□ 0.55
PAX3-208ENST00000409828 OLFM3Q96PB7 478 aa18.48■□□□□ 0.55
PAX3-208ENST00000409828 RSPH9Q9H1X1 276 aaPredicted RBP18.48■□□□□ 0.55
PAX3-208ENST00000409828 SCML1Q9UN30 329 aa18.48■□□□□ 0.55
PAX3-208ENST00000409828 FARP1Q9Y4F1 1045 aaPredicted RBP18.48■□□□□ 0.55
PAX3-208ENST00000409828 TCRBV21S2A2A0A5A6 115 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 J3KR12 359 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 APOC4-APOC2K7ER74 178 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 TJP3O95049 919 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 GSRP00390 522 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 APOC2P02655 101 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 SP9P0CG40 484 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 KRT10P13645 584 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 GABRG2P18507 467 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 CNR2P34972 360 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 HSPA9P38646 679 aaKnown RBP18.47■□□□□ 0.55
PAX3-208ENST00000409828 SLC10A2Q12908 348 aaPredicted RBP18.47■□□□□ 0.55
PAX3-208ENST00000409828 HNRNPDQ14103 355 aaKnown RBP18.47■□□□□ 0.55
PAX3-208ENST00000409828 PDK1Q15118 436 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 ACCSLQ4AC99 568 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 DSG4Q86SJ6 1040 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 WDR5BQ86VZ2 330 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 LONP2Q86WA8 852 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 TMPRSS6Q8IU80 811 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 TP53INP2Q8IXH6 220 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 ZBTB44Q8NCP5 570 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 LRIG1Q96JA1 1093 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 MRGPRX1Q96LB2 322 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 HHIPQ96QV1 700 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 TLR10Q9BXR5 811 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 ZSCAN32Q9NX65 697 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 TRMT1Q9NXH9 659 aaKnown RBP18.47■□□□□ 0.55
PAX3-208ENST00000409828 AMACRQ9UHK6 382 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 PACSIN2Q9UNF0 486 aaPredicted RBP18.47■□□□□ 0.55
PAX3-208ENST00000409828 SPAG17Q6Q759 2223 aa18.47■□□□□ 0.55
PAX3-208ENST00000409828 K7ERQ8 282 aa18.46■□□□□ 0.55
PAX3-208ENST00000409828 PPP1R12AO14974 1030 aaPredicted RBP18.46■□□□□ 0.55
PAX3-208ENST00000409828 RNASEH1O60930 286 aaKnown RBP18.46■□□□□ 0.55
PAX3-208ENST00000409828 TMCC1O94876 653 aa18.46■□□□□ 0.55
PAX3-208ENST00000409828 PEX11BO96011 259 aa18.46■□□□□ 0.55
PAX3-208ENST00000409828 RECQLP46063 649 aaPredicted RBP18.46■□□□□ 0.55
PAX3-208ENST00000409828 CSNK1DP48730 415 aa18.46■□□□□ 0.55
PAX3-208ENST00000409828 SNRPD1P62314 119 aaKnown RBP18.46■□□□□ 0.55
PAX3-208ENST00000409828 PPIDQ08752 370 aaKnown RBP18.46■□□□□ 0.55
PAX3-208ENST00000409828 NSUN2Q08J23 767 aaKnown RBP eCLIP18.46■□□□□ 0.55
PAX3-208ENST00000409828 SFSWAPQ12872 951 aaKnown RBP18.46■□□□□ 0.55
PAX3-208ENST00000409828 BYSLQ13895 437 aaKnown RBP18.46■□□□□ 0.55
PAX3-208ENST00000409828 CARD16Q5EG05 197 aa18.46■□□□□ 0.55
PAX3-208ENST00000409828 ANO7Q6IWH7 933 aa18.46■□□□□ 0.55
PAX3-208ENST00000409828 ZNF366Q8N895 744 aa18.46■□□□□ 0.55
PAX3-208ENST00000409828 MDGA1Q8NFP4 955 aa18.46■□□□□ 0.55
PAX3-208ENST00000409828 OR2AP1Q8NGE2 309 aa18.46■□□□□ 0.55
PAX3-208ENST00000409828 OR2A12Q8NGT7 310 aa18.46■□□□□ 0.55
PAX3-208ENST00000409828 NSMCE1Q8WV22 266 aa18.46■□□□□ 0.55
PAX3-208ENST00000409828 OR8D1Q8WZ84 308 aa18.46■□□□□ 0.55
PAX3-208ENST00000409828 MAML1Q92585 1016 aa18.46■□□□□ 0.55
PAX3-208ENST00000409828 PSKH2Q96QS6 385 aa18.46■□□□□ 0.55
PAX3-208ENST00000409828 FAM129BQ96TA1 746 aa18.46■□□□□ 0.55
PAX3-208ENST00000409828 MKRN2Q9H000 416 aaKnown RBP18.46■□□□□ 0.55
PAX3-208ENST00000409828 POLR3BQ9NW08 1133 aaPredicted RBP18.46■□□□□ 0.55
PAX3-208ENST00000409828 ARIH1Q9Y4X5 557 aaPredicted RBP18.46■□□□□ 0.55
PAX3-208ENST00000409828 PCDHGA2Q9Y5H1 932 aa18.46■□□□□ 0.55
PAX3-208ENST00000409828 AXIN1O15169 862 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 MATN3O15232 486 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 ZNF217O75362 1048 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 ZNF189O75820 626 aaPredicted RBP18.45■□□□□ 0.54
PAX3-208ENST00000409828 IGLV3-19P01714 112 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 NDUFV2P19404 249 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 NUMBP49757 651 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 RENBPP51606 427 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 PTPN5P54829 565 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 XRCC4Q13426 336 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 CYTH1Q15438 398 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 DCAF12L1Q5VU92 463 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 ZNF776Q68DI1 518 aaPredicted RBP18.45■□□□□ 0.54
PAX3-208ENST00000409828 ARHGAP36Q6ZRI8 547 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 Q6ZVU0 165 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 BBS5Q8N3I7 341 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 TEX26Q8N6G2 289 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 TTC13Q8NBP0 860 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 TMIEQ8NEW7 156 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 PRCCQ92733 491 aaPredicted RBP18.45■□□□□ 0.54
PAX3-208ENST00000409828 P3H4Q92791 437 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 SIPA1Q96FS4 1042 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 HAUS2Q9NVX0 235 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 SEPT3Q9UH03 358 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 FCF1Q9Y324 198 aaKnown RBP18.45■□□□□ 0.54
PAX3-208ENST00000409828 HEY1Q9Y5J3 304 aa18.45■□□□□ 0.54
PAX3-208ENST00000409828 USP27XA6NNY8 438 aa18.44■□□□□ 0.54
PAX3-208ENST00000409828 ADH1BP00325 375 aa18.44■□□□□ 0.54
PAX3-208ENST00000409828 PRNPP04156 253 aa18.44■□□□□ 0.54
PAX3-208ENST00000409828 RPS14P62263 151 aaKnown RBP18.44■□□□□ 0.54
PAX3-208ENST00000409828 ADCY2Q08462 1091 aa18.44■□□□□ 0.54
PAX3-208ENST00000409828 TCF15Q12870 199 aa18.44■□□□□ 0.54
PAX3-208ENST00000409828 KLF1Q13351 362 aaPredicted RBP18.44■□□□□ 0.54
PAX3-208ENST00000409828 LBRQ14739 615 aaKnown RBP18.44■□□□□ 0.54
PAX3-208ENST00000409828 GRM3Q14832 879 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms