RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ZSCAN1Q8NBB4 408 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 TRIB2Q92519 343 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 SLC38A3Q99624 504 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 THUMPD3Q9BV44 507 aaKnown RBP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 CCDC90BQ9GZT6 254 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 LHX5Q9H2C1 402 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 SFXN1Q9H9B4 322 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 TXNRD2Q9NNW7 524 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 OPTCQ9UBM4 332 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 ATP6V1HQ9UI12 483 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 KCNK1O00180 336 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 HNRNPRO43390 633 aaKnown RBP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 SKAP2O75563 359 aaPredicted RBP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 VAPBO95292 243 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 GJB6O95452 261 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 C1RP00736 705 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 ABCB1P08183 1280 aaPredicted RBP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 ATP4AP20648 1035 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 KDELR1P24390 212 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 EEF1DP29692 281 aaKnown RBP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 TTPAP49638 278 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 CCR4P51679 360 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 SRSF11Q05519 484 aaKnown RBP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 FUT11Q495W5 492 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 RAD9BQ6WBX8 426 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 RBM43Q6ZSC3 357 aaKnown RBP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 PSTKQ8IV42 348 aaKnown RBP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 OR6K2Q8NGY2 324 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 STARD8Q92502 1023 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 IRF7Q92985 503 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 CMTM5Q96DZ9 223 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 LPIN3Q9BQK8 851 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 HEPHQ9BQS7 1158 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 PCDH9Q9HC56 1237 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 RPRD1BQ9NQG5 326 aaKnown RBP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 MPP6Q9NZW5 540 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 SH3BP4Q9P0V3 963 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 ZNF214Q9UL59 606 aaPredicted RBP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 PLAGL2Q9UPG8 496 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 STBD1O95210 358 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 IMPDH2P12268 514 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 ENO3P13929 434 aaPredicted RBP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 KCNA5P22460 613 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 SOX11P35716 441 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 IL2P60568 153 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 HSPA14Q0VDF9 509 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 NAB1Q13506 487 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 ALFQ53S48 1182 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 DIS3LQ8TF46 1054 aaKnown RBP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 ZBTB10Q96DT7 871 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 NPHS2Q9NP85 383 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 OSGEPQ9NPF4 335 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 POLG2Q9UHN1 485 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 GTF2A1LQ9UNN4 478 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 YIPF1Q9Y548 306 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 IGKV6D-41A0A0C4DH26 115 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 USP27XA6NNY8 438 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 SGTAO43765 313 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 GPR15P49685 360 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 BLVRAP53004 296 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 SH3BGRP55822 239 aaPredicted RBP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 RPS7P62081 194 aaKnown RBP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 AP2B1P63010 937 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 FOXM1Q08050 763 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 MAMLD1Q13495 774 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 TMEM63BQ5T3F8 832 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 ICE2Q659A1 982 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 GPSM1Q86YR5 675 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 ACTL9Q8TC94 416 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 CD101Q93033 1021 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 TMEM237Q96Q45 408 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 PRRG4Q9BZD6 226 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 CDHR5Q9HBB8 845 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 SIRPGQ9P1W8 387 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 ASF1AQ9Y294 204 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 PCDHA11Q9Y5I1 949 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 DUOX1Q9NRD9 1551 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 E9PAM4 449 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 SERPINI2O75830 405 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 UGT2B4P06133 528 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 CNPP09543 421 aaKnown RBP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 CSF2RAP15509 400 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 CASP5P51878 434 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 RABGGTBP53611 331 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 SLC20A2Q08357 652 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 MAPK7Q13164 816 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 PDE1CQ14123 709 aaPredicted RBP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 C2orf27AQ580R0 203 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 RFWD3Q6PCD5 774 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 CHRDL2Q6WN34 429 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 LRRC6Q86X45 466 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 SGSM3Q96HU1 749 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 EXOC2Q96KP1 924 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 FBXL18Q96ME1 805 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 NECTIN4Q96NY8 510 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 ISCUQ9H1K1 167 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 TNKS2Q9H2K2 1166 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 RAD21L1Q9H4I0 556 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 KCTD5Q9NXV2 234 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 TMCC3Q9ULS5 477 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms