RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 TPP1O14773 563 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 TSPAN3O60637 253 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 ZNF623O75123 536 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 LTA4HP09960 611 aaKnown RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 LMO2P25791 158 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 OR1D2P34982 312 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 CD86P42081 329 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 SKIV2L2P42285 1042 aaKnown RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 GLRBP48167 497 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 SNRPD1P62314 119 aaKnown RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 ZNF33AQ06730 810 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 CDK18Q07002 472 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 SEMA5AQ13591 1074 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 CRYMQ14894 314 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 PDCD2Q16342 344 aaPredicted RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 TIGD5Q53EQ6 642 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 VARS2Q5ST30 1063 aaKnown RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 TMTC4Q5T4D3 741 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 DCAF12L1Q5VU92 463 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 ERAP2Q6P179 960 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 KIAA0408Q6ZU52 694 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 PIWIL4Q7Z3Z4 852 aaKnown RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 TAC4Q86UU9 113 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 SCUBE1Q8IWY4 988 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 FBXO39Q8N4B4 442 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 CEP70Q8NHQ1 597 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 PIWIL2Q8TC59 973 aaKnown RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 MIPOL1Q8TD10 442 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 LENG1Q96BZ8 264 aaPredicted RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 SEMA3CQ99985 751 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 SPATA16Q9BXB7 569 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 ADAMTS10Q9H324 1103 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 CASS4Q9NQ75 786 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 ASAH2Q9NR71 780 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 FBXO5Q9UKT4 447 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 PLA2G4CQ9UP65 541 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 TNPO3Q9Y5L0 923 aaKnown RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 LOC100653049A0A140TA62 436 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 TRAFD1O14545 582 aaPredicted RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 MATN3O15232 486 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 EDF1O60869 148 aaKnown RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 E2F6O75461 281 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 KRT34O76011 436 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 STBD1O95210 358 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 HNRNPH1P31943 449 aaKnown RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 SERPINB5P36952 375 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 VHLP40337 213 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 HSPA13P48723 471 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 TTPAP49638 278 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 ATP6V0D1P61421 351 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 SLC20A2Q08357 652 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 MAD2L1Q13257 205 aaPredicted RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 HNRNPDQ14103 355 aaKnown RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 SPDYAQ5MJ70 313 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 PRMT9Q6P2P2 845 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 CES3Q6UWW8 571 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 OLFML1Q6UWY5 402 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 BNC2Q6ZN30 1099 aaPredicted RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 CLEC20AQ6ZU45 233 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 USP45Q70EL2 814 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 DSG4Q86SJ6 1040 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 RTL3Q8N8U3 475 aaKnown RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 OR56A4Q8NGH8 313 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 N4BP2L2Q92802 583 aaPredicted RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 OLFM3Q96PB7 478 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 MRPL57Q9BQC6 102 aaKnown RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 MLPHQ9BV36 600 aaPredicted RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 APOL5Q9BWW9 433 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 SLC25A51Q9H1U9 297 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 MAGEH1Q9H213 219 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 IRAK4Q9NWZ3 460 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 SYBUQ9NX95 663 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 GMIPQ9P107 970 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 POLG2Q9UHN1 485 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 APPL1Q9UKG1 709 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 CORO1CQ9ULV4 474 aaPredicted RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 ARIH1Q9Y4X5 557 aaPredicted RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 LAMB1P07942 1786 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 RREB1Q92766 1687 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 E9PAM4 449 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 UBDO15205 165 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 IRAK2O43187 625 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 LZTS3O60299 673 aaPredicted RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 USP1O94782 785 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 LRIG2O94898 1065 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 KRT6AP02538 564 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 KRT6BP04259 564 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 OR56A5P0C7T3 313 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 ACADSP16219 412 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 CRHR1P34998 444 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 KRT6CP48668 564 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 NUDT2P50583 147 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 RPL14P50914 215 aaKnown RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 SLC18A1P54219 525 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 RAB10P61026 200 aa4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 SMAD3P84022 425 aaKnown RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 SLC25A11Q02978 314 aaKnown RBP4.8□□□□□ -1.64
PCDH11X-207ENST00000406881 WASHC5Q12768 1159 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 411.5 ms