RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 MAELQ96JY0 434 aaKnown RBP10.01□□□□□ -0.81
MSH2-202ENST00000406134 SENP8Q96LD8 212 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 TMEM209Q96SK2 561 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 CYP4F11Q9HBI6 524 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 STAP1Q9ULZ2 295 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 CCDC78A2IDD5 438 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 MAGEA13PA6NCF6 341 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 MYADML2A6NDP7 307 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 TMEM233B4DJY2 109 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 PHGDHO43175 533 aaKnown RBP10.01□□□□□ -0.81
MSH2-202ENST00000406134 ATP9BO43861 1147 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 WISP3O95389 354 aaPredicted RBP10.01□□□□□ -0.81
MSH2-202ENST00000406134 PEX11BO96011 259 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 FAM200BP0CF97 657 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 DESP17661 470 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 SPRP35270 261 aaPredicted RBP10.01□□□□□ -0.81
MSH2-202ENST00000406134 PSEN2P49810 448 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 CSE1LP55060 971 aaKnown RBP10.01□□□□□ -0.81
MSH2-202ENST00000406134 BEX3Q00994 111 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 TBL3Q12788 808 aaKnown RBP10.01□□□□□ -0.81
MSH2-202ENST00000406134 MPP3Q13368 585 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 CCL14Q16627 93 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 ZNF280DQ6N043 979 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 UGT2A3Q6UWM9 527 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 ANKRD23Q86SG2 305 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 LILRA2Q8N149 483 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 STON2Q8WXE9 905 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 ACE2Q9BYF1 805 aaPredicted RBP10.01□□□□□ -0.81
MSH2-202ENST00000406134 TKTL2Q9H0I9 626 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 TREX1Q9NSU2 369 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 ARHGEF38Q9NXL2 777 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 GOLGA8QA0A0J9YX86 632 aa10□□□□□ -0.81
MSH2-202ENST00000406134 GOLGA8OA6NCC3 632 aa10□□□□□ -0.81
MSH2-202ENST00000406134 GOLGA8NF8WBI6 632 aa10□□□□□ -0.81
MSH2-202ENST00000406134 DLX3O60479 287 aa10□□□□□ -0.81
MSH2-202ENST00000406134 MAFKO60675 156 aa10□□□□□ -0.81
MSH2-202ENST00000406134 AP1G2O75843 785 aa10□□□□□ -0.81
MSH2-202ENST00000406134 NCAM1P13591 858 aa10□□□□□ -0.81
MSH2-202ENST00000406134 MX2P20592 715 aa10□□□□□ -0.81
MSH2-202ENST00000406134 PIK3R1P27986 724 aa10□□□□□ -0.81
MSH2-202ENST00000406134 EPHA3P29320 983 aa10□□□□□ -0.81
MSH2-202ENST00000406134 EPHB1P54762 984 aa10□□□□□ -0.81
MSH2-202ENST00000406134 MS4A2Q01362 244 aa10□□□□□ -0.81
MSH2-202ENST00000406134 ARL13AQ5H913 290 aaPredicted RBP10□□□□□ -0.81
MSH2-202ENST00000406134 PELI3Q8N2H9 469 aa10□□□□□ -0.81
MSH2-202ENST00000406134 PNPLA1Q8N8W4 532 aa10□□□□□ -0.81
MSH2-202ENST00000406134 SPDYE1Q8NFV5 336 aaPredicted RBP10□□□□□ -0.81
MSH2-202ENST00000406134 PPP1R14CQ8TAE6 165 aa10□□□□□ -0.81
MSH2-202ENST00000406134 NCSTNQ92542 709 aa10□□□□□ -0.81
MSH2-202ENST00000406134 LPPQ93052 612 aa10□□□□□ -0.81
MSH2-202ENST00000406134 DDIT4Q9NX09 232 aa10□□□□□ -0.81
MSH2-202ENST00000406134 OR12D3Q9UGF7 316 aa10□□□□□ -0.81
MSH2-202ENST00000406134 MRPL42Q9Y6G3 142 aaKnown RBP10□□□□□ -0.81
MSH2-202ENST00000406134 CCL15-CCL14A0A0B4J2E2 113 aa10□□□□□ -0.81
MSH2-202ENST00000406134 AHCYL1O43865 530 aa10□□□□□ -0.81
MSH2-202ENST00000406134 TRIM13O60858 407 aa10□□□□□ -0.81
MSH2-202ENST00000406134 FAM163BP0C2L3 166 aa10□□□□□ -0.81
MSH2-202ENST00000406134 ZCCHC18P0CG32 403 aa10□□□□□ -0.81
MSH2-202ENST00000406134 GRIA4P48058 902 aa10□□□□□ -0.81
MSH2-202ENST00000406134 CCL15Q16663 113 aa10□□□□□ -0.81
MSH2-202ENST00000406134 FAM171BQ6P995 826 aa10□□□□□ -0.81
MSH2-202ENST00000406134 ACAD11Q709F0 780 aa10□□□□□ -0.81
MSH2-202ENST00000406134 LRRTM3Q86VH5 581 aa10□□□□□ -0.81
MSH2-202ENST00000406134 SLC41A1Q8IVJ1 513 aa10□□□□□ -0.81
MSH2-202ENST00000406134 SIX6OS1Q8N1H7 587 aa10□□□□□ -0.81
MSH2-202ENST00000406134 FSTL5Q8N475 847 aaPredicted RBP10□□□□□ -0.81
MSH2-202ENST00000406134 KDM1BQ8NB78 822 aa10□□□□□ -0.81
MSH2-202ENST00000406134 KCTD4Q8WVF5 259 aa10□□□□□ -0.81
MSH2-202ENST00000406134 CCDC124Q96CT7 223 aaKnown RBP10□□□□□ -0.81
MSH2-202ENST00000406134 APBA2Q99767 749 aa10□□□□□ -0.81
MSH2-202ENST00000406134 TSPYL2Q9H2G4 693 aaPredicted RBP10□□□□□ -0.81
MSH2-202ENST00000406134 C20orf96Q9NUD7 363 aaPredicted RBP10□□□□□ -0.81
MSH2-202ENST00000406134 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10□□□□□ -0.81
MSH2-202ENST00000406134 RIMS3Q9UJD0 308 aa10□□□□□ -0.81
MSH2-202ENST00000406134 ERI2A8K979 691 aaKnown RBP10□□□□□ -0.81
MSH2-202ENST00000406134 STK10O94804 968 aaKnown RBP10□□□□□ -0.81
MSH2-202ENST00000406134 RAG1P15918 1043 aa10□□□□□ -0.81
MSH2-202ENST00000406134 KCNA5P22460 613 aa10□□□□□ -0.81
MSH2-202ENST00000406134 AVPR1AP37288 418 aa10□□□□□ -0.81
MSH2-202ENST00000406134 THOP1P52888 689 aa10□□□□□ -0.81
MSH2-202ENST00000406134 CDC42EP1Q00587 391 aa10□□□□□ -0.81
MSH2-202ENST00000406134 CUL3Q13618 768 aa10□□□□□ -0.81
MSH2-202ENST00000406134 CEACAM7Q14002 265 aa10□□□□□ -0.81
MSH2-202ENST00000406134 UPP1Q16831 310 aa10□□□□□ -0.81
MSH2-202ENST00000406134 ZNF789Q5FWF6 425 aa10□□□□□ -0.81
MSH2-202ENST00000406134 C9orf131Q5VYM1 1079 aa10□□□□□ -0.81
MSH2-202ENST00000406134 LIPMQ5VYY2 423 aa10□□□□□ -0.81
MSH2-202ENST00000406134 AGMOQ6ZNB7 445 aa10□□□□□ -0.81
MSH2-202ENST00000406134 DPP9Q86TI2 863 aa10□□□□□ -0.81
MSH2-202ENST00000406134 SPATA6LQ8N4H0 392 aa10□□□□□ -0.81
MSH2-202ENST00000406134 ZNF513Q8N8E2 541 aaPredicted RBP10□□□□□ -0.81
MSH2-202ENST00000406134 GDPD5Q8WTR4 605 aa10□□□□□ -0.81
MSH2-202ENST00000406134 IL12RB2Q99665 862 aa10□□□□□ -0.81
MSH2-202ENST00000406134 SUDS3Q9H7L9 328 aaPredicted RBP10□□□□□ -0.81
MSH2-202ENST00000406134 SSX2IPQ9Y2D8 614 aa10□□□□□ -0.81
MSH2-202ENST00000406134 F8W810 466 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 CIB2O75838 187 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 NCF2P19878 526 aaPredicted RBP9.99□□□□□ -0.81
MSH2-202ENST00000406134 MXRA7P84157 204 aa9.99□□□□□ -0.81
MSH2-202ENST00000406134 LRRC36Q1X8D7 754 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms