RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 ZCCHC14Q8WYQ9 949 aaKnown RBP15.71■□□□□ 0.11
TPM1-207ENST00000403994 CENPIQ92674 756 aaPredicted RBP15.71■□□□□ 0.11
TPM1-207ENST00000403994 ARRDC3Q96B67 414 aa15.71■□□□□ 0.11
TPM1-207ENST00000403994 SKA1Q96BD8 255 aa15.71■□□□□ 0.11
TPM1-207ENST00000403994 ELF4Q99607 663 aaPredicted RBP15.71■□□□□ 0.11
TPM1-207ENST00000403994 TNKS2Q9H2K2 1166 aa15.71■□□□□ 0.11
TPM1-207ENST00000403994 PREBQ9HCU5 417 aa15.71■□□□□ 0.11
TPM1-207ENST00000403994 SEPT11Q9NVA2 429 aaKnown RBP15.71■□□□□ 0.11
TPM1-207ENST00000403994 TMEM63CQ9P1W3 806 aa15.71■□□□□ 0.11
TPM1-207ENST00000403994 ARHGAP20Q9P2F6 1191 aa15.71■□□□□ 0.11
TPM1-207ENST00000403994 OR12D3Q9UGF7 316 aa15.71■□□□□ 0.11
TPM1-207ENST00000403994 ZMIZ1Q9ULJ6 1067 aa15.71■□□□□ 0.11
TPM1-207ENST00000403994 FARP1Q9Y4F1 1045 aaPredicted RBP15.71■□□□□ 0.11
TPM1-207ENST00000403994 FAM72CH0Y354 149 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 RNF103O00237 685 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 ZNF821O75541 412 aaPredicted RBP15.7■□□□□ 0.1
TPM1-207ENST00000403994 DKK1O94907 266 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 PRNPP04156 253 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 ATXN1LP0C7T5 689 aaKnown RBP15.7■□□□□ 0.1
TPM1-207ENST00000403994 KRT3P12035 628 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 CDK11BP21127 795 aaKnown RBP15.7■□□□□ 0.1
TPM1-207ENST00000403994 RFC1P35251 1148 aaPredicted RBP15.7■□□□□ 0.1
TPM1-207ENST00000403994 NUDT1P36639 197 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 NXPH1P58417 271 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 ARF5P84085 180 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 INAVAQ3KP66 663 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 ARL13BQ3SXY8 428 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 ANO6Q4KMQ2 910 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 FAM72AQ5TYM5 149 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 FAM72DQ6L9T8 149 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 RETSATQ6NUM9 610 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 FAM72BQ86X60 149 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 TMIEQ8NEW7 156 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 SPON2Q9BUD6 331 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 CEP44Q9C0F1 390 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 GDF3Q9NR23 364 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 NDFIP2Q9NV92 336 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 DMTF1Q9Y222 760 aa15.7■□□□□ 0.1
TPM1-207ENST00000403994 APC2O95996 2303 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 TCRBV5S1A1TA0A578 114 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 LRIG2O94898 1065 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 GPD1P21695 349 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 EPHA8P29322 1005 aaPredicted RBP15.69■□□□□ 0.1
TPM1-207ENST00000403994 ACVRL1P37023 503 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 MAPKAPK2P49137 400 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 C1QBPQ07021 282 aaKnown RBP15.69■□□□□ 0.1
TPM1-207ENST00000403994 SCAPQ12770 1279 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 SHBQ15464 509 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 SETMARQ53H47 684 aaPredicted RBP15.69■□□□□ 0.1
TPM1-207ENST00000403994 SLC45A4Q5BKX6 768 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 PRAMEF14Q5SWL7 426 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 RWDD4Q6NW29 188 aaKnown RBP15.69■□□□□ 0.1
TPM1-207ENST00000403994 DNAJC24Q6P3W2 148 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 DPY19L3Q6ZPD9 716 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 GATAD2AQ86YP4 633 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 PCDH20Q8N6Y1 951 aaKnown RBP15.69■□□□□ 0.1
TPM1-207ENST00000403994 NTAN1Q96AB6 310 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 TBC1D31Q96DN5 1066 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 MCEEQ96PE7 176 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 AGPAT1Q99943 283 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 SELENOOQ9BVL4 669 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 OSBPL2Q9H1P3 480 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 TMEM248Q9NWD8 314 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 IL36AQ9UHA7 158 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 ACTL7AQ9Y615 435 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 WASF2Q9Y6W5 498 aa15.69■□□□□ 0.1
TPM1-207ENST00000403994 TRPM6Q9BX84 2022 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 TLR4O00206 839 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 YKT6O15498 198 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 CCP110O43303 1012 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 TNFSF14O43557 240 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 LEFTY1O75610 366 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 CD160O95971 181 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 PLEKP08567 350 aaPredicted RBP15.68■□□□□ 0.1
TPM1-207ENST00000403994 RHOQP17081 205 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 ETFBP38117 255 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 RECQLP46063 649 aaPredicted RBP15.68■□□□□ 0.1
TPM1-207ENST00000403994 WDR59Q6PJI9 974 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 PRPF39Q86UA1 669 aaKnown RBP15.68■□□□□ 0.1
TPM1-207ENST00000403994 SPATS2Q86XZ4 545 aaKnown RBP15.68■□□□□ 0.1
TPM1-207ENST00000403994 MFSD2AQ8NA29 543 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 SAP25Q8TEE9 199 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 PPP1R16AQ96I34 528 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 BPIFA3Q9BQP9 254 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 SYT11Q9BT88 431 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 HDAC8Q9BY41 377 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 MAGEB5Q9BZ81 275 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 NAT10Q9H0A0 1025 aaKnown RBP15.68■□□□□ 0.1
TPM1-207ENST00000403994 DYRK4Q9NR20 520 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 FTSJ1Q9UET6 329 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 CA5BQ9Y2D0 317 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 FCF1Q9Y324 198 aaKnown RBP15.68■□□□□ 0.1
TPM1-207ENST00000403994 ARID1BQ8NFD5 2236 aaPredicted RBP15.68■□□□□ 0.1
TPM1-207ENST00000403994 LOC400499M0QZD8 3231 aa15.68■□□□□ 0.1
TPM1-207ENST00000403994 ACACAQ13085 2346 aa15.67■□□□□ 0.1
TPM1-207ENST00000403994 CXorf51AA0A1B0GTR3 108 aa15.67■□□□□ 0.1
TPM1-207ENST00000403994 SIGLEC16A6NMB1 481 aa15.67■□□□□ 0.1
TPM1-207ENST00000403994 GOLGA8CPA6NN73 597 aa15.67■□□□□ 0.1
TPM1-207ENST00000403994 TEX33O43247 280 aa15.67■□□□□ 0.1
TPM1-207ENST00000403994 RNGTTO60942 597 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms