RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 ESRP1Q6NXG1 681 aaKnown RBP12.17□□□□□ -0.46
RBM39-206ENST00000403542 NLGN2Q8NFZ4 835 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 ZFAND2BQ8WV99 257 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 WNT8BQ93098 351 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 OPTNQ96CV9 577 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 PHF21BQ96EK2 531 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 TSNARE1Q96NA8 513 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 STN1Q9H668 368 aaKnown RBP12.17□□□□□ -0.46
RBM39-206ENST00000403542 IL1RL2Q9HB29 575 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 CCDC167Q9P0B6 97 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 STK39Q9UEW8 545 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 PSMD13Q9UNM6 376 aa12.17□□□□□ -0.46
RBM39-206ENST00000403542 A0A0G2JLL6 359 aaPredicted RBP12.16□□□□□ -0.46
RBM39-206ENST00000403542 DCLK1O15075 740 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 DLX3O60479 287 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 PYGLP06737 847 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 SMIM18P0DKX4 95 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 CHRNA4P43681 627 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 SNAPC2Q13487 334 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 DPYSQ14117 519 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 CLEC20AQ6ZU45 233 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 PAQR9Q6ZVX9 377 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 PRRT2Q7Z6L0 340 aaPredicted RBP12.16□□□□□ -0.46
RBM39-206ENST00000403542 TMEM135Q86UB9 458 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 LINC01465Q8N7H1 131 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 SREK1Q8WXA9 508 aaKnown RBP12.16□□□□□ -0.46
RBM39-206ENST00000403542 SLC45A3Q96JT2 553 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 NAT9Q9BTE0 207 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 LIN28AQ9H9Z2 209 aaKnown RBP12.16□□□□□ -0.46
RBM39-206ENST00000403542 CDYLQ9Y232 598 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 XPO1O14980 1071 aaKnown RBP12.16□□□□□ -0.46
RBM39-206ENST00000403542 TFAP2AP05549 437 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 SLC35E2BP0CK96 405 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 ALOX15P16050 662 aaPredicted RBP12.16□□□□□ -0.46
RBM39-206ENST00000403542 YBX3P16989 372 aaKnown RBP eCLIP12.16□□□□□ -0.46
RBM39-206ENST00000403542 NPR3P17342 541 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 EPHX2P34913 555 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 NOS2P35228 1153 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 CXCR3P49682 368 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 LILRA4P59901 499 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 RARS2Q5T160 578 aaKnown RBP12.16□□□□□ -0.46
RBM39-206ENST00000403542 IL23RQ5VWK5 629 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 CYS1Q717R9 158 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 ADGRG6Q86SQ4 1221 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 LDB1Q86U70 411 aaPredicted RBP12.16□□□□□ -0.46
RBM39-206ENST00000403542 UNC93AQ86WB7 457 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 MFSD6LQ8IWD5 586 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 TTC39CQ8N584 583 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 FAM110BQ8TC76 370 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 EXT2Q93063 718 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 DCPSQ96C86 337 aaKnown RBP12.16□□□□□ -0.46
RBM39-206ENST00000403542 NPY6RQ99463 290 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 TKTL2Q9H0I9 626 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 ZNF408Q9H9D4 720 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 PLEKHA5Q9HAU0 1116 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 VCX3AQ9NNX9 186 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 TNFRSF12AQ9NP84 129 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 ZDHHC7Q9NXF8 308 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 OR12D3Q9UGF7 316 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 STAP1Q9ULZ2 295 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 COPG1Q9Y678 874 aaKnown RBP12.16□□□□□ -0.46
RBM39-206ENST00000403542 ANKRD12Q6UB98 2062 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 TTC24A2A3L6 582 aaPredicted RBP12.16□□□□□ -0.46
RBM39-206ENST00000403542 MYBPHLA2RUH7 354 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 HNRNPRO43390 633 aaKnown RBP12.16□□□□□ -0.46
RBM39-206ENST00000403542 RNASEH2AO75792 299 aaKnown RBP12.16□□□□□ -0.46
RBM39-206ENST00000403542 PPARGP37231 505 aaPredicted RBP12.16□□□□□ -0.46
RBM39-206ENST00000403542 TAF6P49848 677 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 INHBCP55103 352 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 CSHL1Q14406 222 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 ZBTB6Q15916 424 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 ZNF423Q2M1K9 1284 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 OGFRL1Q5TC84 451 aaPredicted RBP12.16□□□□□ -0.46
RBM39-206ENST00000403542 LIPMQ5VYY2 423 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 MAMDC4Q6UXC1 1216 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 CENPLQ8N0S6 344 aaPredicted RBP12.16□□□□□ -0.46
RBM39-206ENST00000403542 LSMEM2Q8N112 164 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 OR9I1Q8NGQ6 314 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 EME1Q96AY2 570 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 HIC2Q96JB3 615 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 ELMO2Q96JJ3 720 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 DUSP16Q9BY84 665 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 TRIM8Q9BZR9 551 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 SPON1Q9HCB6 807 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 IGSF9Q9P2J2 1179 aa12.16□□□□□ -0.46
RBM39-206ENST00000403542 DYNC1LI2O43237 492 aaPredicted RBP12.15□□□□□ -0.46
RBM39-206ENST00000403542 PGK1P00558 417 aa12.15□□□□□ -0.46
RBM39-206ENST00000403542 MYL4P12829 197 aa12.15□□□□□ -0.46
RBM39-206ENST00000403542 CYP2B6P20813 491 aa12.15□□□□□ -0.46
RBM39-206ENST00000403542 MYBPC1Q00872 1141 aa12.15□□□□□ -0.46
RBM39-206ENST00000403542 PTK2BQ14289 1009 aa12.15□□□□□ -0.46
RBM39-206ENST00000403542 ZNF789Q5FWF6 425 aa12.15□□□□□ -0.46
RBM39-206ENST00000403542 NOTUMQ6P988 496 aa12.15□□□□□ -0.46
RBM39-206ENST00000403542 CLEC14AQ86T13 490 aa12.15□□□□□ -0.46
RBM39-206ENST00000403542 ZC3HC1Q86WB0 502 aaKnown RBP12.15□□□□□ -0.46
RBM39-206ENST00000403542 CRYBG2Q8N1P7 616 aa12.15□□□□□ -0.46
RBM39-206ENST00000403542 TTC16Q8NEE8 873 aa12.15□□□□□ -0.46
RBM39-206ENST00000403542 HASPINQ8TF76 798 aa12.15□□□□□ -0.46
RBM39-206ENST00000403542 EZH1Q92800 747 aaPredicted RBP12.15□□□□□ -0.46
RBM39-206ENST00000403542 ZNF419Q96HQ0 510 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms