RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 TMC7Q7Z402 723 aa7.82□□□□□ -1.16
HDAC9-201ENST00000401921 NET1Q7Z628 596 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-201ENST00000401921 PTAR1Q7Z6K3 402 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-201ENST00000401921 TAC4Q86UU9 113 aa7.82□□□□□ -1.16
HDAC9-201ENST00000401921 SPATA24Q86W54 205 aa7.82□□□□□ -1.16
HDAC9-201ENST00000401921 NPWQ8N729 165 aa7.82□□□□□ -1.16
HDAC9-201ENST00000401921 PHF21BQ96EK2 531 aa7.82□□□□□ -1.16
HDAC9-201ENST00000401921 ZNF333Q96JL9 665 aa7.82□□□□□ -1.16
HDAC9-201ENST00000401921 TSPAN18Q96SJ8 248 aa7.82□□□□□ -1.16
HDAC9-201ENST00000401921 IL22Q9GZX6 179 aa7.82□□□□□ -1.16
HDAC9-201ENST00000401921 ARHGEF38Q9NXL2 777 aa7.82□□□□□ -1.16
HDAC9-201ENST00000401921 GALNT8Q9NY28 637 aa7.82□□□□□ -1.16
HDAC9-201ENST00000401921 IGSF9Q9P2J2 1179 aa7.82□□□□□ -1.16
HDAC9-201ENST00000401921 TRHDEQ9UKU6 1024 aa7.82□□□□□ -1.16
HDAC9-201ENST00000401921 RPL26L1Q9UNX3 145 aaKnown RBP7.82□□□□□ -1.16
HDAC9-201ENST00000401921 BUD23O43709 281 aaKnown RBP7.81□□□□□ -1.16
HDAC9-201ENST00000401921 MAGEC1O60732 1142 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 SORBS2O94875 1100 aaKnown RBP7.81□□□□□ -1.16
HDAC9-201ENST00000401921 STAMBPO95630 424 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 MPOP05164 745 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 KCNE1P15382 129 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 PAMP19021 973 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 PRAMEP78395 509 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 MPP1Q00013 466 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 GRB14Q14449 540 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 MYBPC3Q14896 1274 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 ANO4Q32M45 955 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 SLC9B1Q4ZJI4 515 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 TIGD5Q53EQ6 642 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 LDLRAD1Q5T700 205 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 ESRP1Q6NXG1 681 aaKnown RBP7.81□□□□□ -1.16
HDAC9-201ENST00000401921 ARHGAP36Q6ZRI8 547 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 PAQR9Q6ZVX9 377 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 LINC00523Q86TU6 105 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 PNPLA1Q8N8W4 532 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 EMID1Q96A84 441 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-201ENST00000401921 LRGUKQ96M69 825 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 OLFM3Q96PB7 478 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 FAM193BQ96PV7 902 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-201ENST00000401921 SERPINI1Q99574 410 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 NDNQ99608 321 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 FTHL17Q9BXU8 183 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 NACA2Q9H009 215 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 NT5MQ9NPB1 228 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 RHBDL2Q9NX52 303 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 MIOSQ9NXC5 875 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 EMCNQ9ULC0 261 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 PPM1HQ9ULR3 514 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 AAR2Q9Y312 384 aaKnown RBP7.81□□□□□ -1.16
HDAC9-201ENST00000401921 TRIP12Q14669 1992 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-201ENST00000401921 ANXA9O76027 345 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 AMHP03971 560 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 COX4I1P13073 169 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 TSPAN8P19075 237 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 CD52P31358 61 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 MAGEA6P43360 314 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 CHRNA4P43681 627 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 MED21Q13503 144 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 PAFAH1B3Q15102 231 aaKnown RBP7.81□□□□□ -1.16
HDAC9-201ENST00000401921 UGP2Q16851 508 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 UBXN11Q5T124 520 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 RNF220Q5VTB9 566 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 TIFABQ6ZNK6 161 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 DOCK3Q8IZD9 2030 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 ENDOVQ8N8Q3 282 aaKnown RBP7.81□□□□□ -1.16
HDAC9-201ENST00000401921 RAB3IL1Q8TBN0 382 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 DQX1Q8TE96 717 aaKnown RBP7.81□□□□□ -1.16
HDAC9-201ENST00000401921 LENG8Q96PV6 779 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-201ENST00000401921 OR52B2Q96RD2 323 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 CDRT15Q96T59 188 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 VCX3BQ9H321 246 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 CATSPERBQ9H7T0 1116 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 XPR1Q9UBH6 696 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 CDYLQ9Y232 598 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 FAM95CA0A1B0GW59 222 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 MAGEB16A2A368 324 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 ARL5CA6NH57 179 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 CCL22O00626 93 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 DCLK1O15075 740 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 SNNO75324 88 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-201ENST00000401921 TRPA1O75762 1119 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 DDHD2O94830 711 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 HNRNPLP14866 589 aaKnown RBP eCLIP7.81□□□□□ -1.16
HDAC9-201ENST00000401921 RAG1P15918 1043 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 SCNN1AP37088 669 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 OR1G1P47890 313 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 CDK7P50613 346 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 MRPS6P82932 125 aaKnown RBP7.81□□□□□ -1.16
HDAC9-201ENST00000401921 NIPAL4Q0D2K0 466 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 KLF10Q13118 480 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 ARL13AQ5H913 290 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-201ENST00000401921 NOMO2Q5JPE7 1267 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 MAP3K21Q5TCX8 1036 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 KIAA0319Q5VV43 1072 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 TMEM198Q66K66 360 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 TAF2Q6P1X5 1199 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 ZNF467Q7Z7K2 595 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-201ENST00000401921 GALNT4Q8N4A0 578 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 AFAP1L2Q8N4X5 818 aa7.81□□□□□ -1.16
HDAC9-201ENST00000401921 ACVR1CQ8NER5 493 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms