RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 NEDD8Q15843 81 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 STYK1Q6J9G0 422 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 ABHD15Q6UXT9 468 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 OFCC1Q8IZS5 231 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 CATSPER1Q8NEC5 780 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 FAM151AQ8WW52 585 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 CYGBQ8WWM9 190 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 RPL10LQ96L21 214 aaKnown RBP10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 MRGPRX2Q96LB1 330 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 FCRL3Q96P31 734 aaPredicted RBP10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 CYP4F12Q9HCS2 524 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 RBMX2Q9Y388 322 aaKnown RBP10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 ATP6AP2A0A1C7CYW4 349 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 YDJCA8MPS7 323 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 E7ENX8 843 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 OGTO15294 1046 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 ATP6AP2O75787 350 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 SUPT20HL2P0C7V6 817 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 PIM1P11309 404 aaPredicted RBP10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 LCP1P13796 627 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 TSPAN8P19075 237 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 NR4A1P22736 598 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 ABCD1P33897 745 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 GARSP41250 739 aaKnown RBP10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 NDST1P52848 882 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 EPHA4P54764 986 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 SFSWAPQ12872 951 aaKnown RBP10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 BNIP3Q12983 259 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 APOFQ13790 326 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 IKBKEQ14164 716 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 SUPT20HL1Q3ZLR7 823 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 LDLRAP1Q5SW96 308 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 PMF1Q6P1K2 205 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 TTC33Q6PID6 262 aaPredicted RBP10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 ACOT1Q86TX2 421 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 HERC6Q8IVU3 1022 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 SREK1Q8WXA9 508 aaKnown RBP10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 LPGAT1Q92604 370 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 C12orf43Q96C57 262 aaKnown RBP10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 LRRC39Q96DD0 335 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 MRPL4Q9BYD3 311 aaKnown RBP10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 TRIM8Q9BZR9 551 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 STYXL1Q9Y6J8 313 aa10.04□□□□□ -0.8
PTCHD4-202ENST00000398738 RNF103-CHMP3A0A140T963 221 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 TTC36A6NLP5 189 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 HDAC3O15379 428 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 MT-ND1P03886 318 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 ATP5BP06576 529 aaKnown RBP10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 HOXC6P09630 235 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 MCF2P10911 925 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 MYL4P12829 197 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 ZNF26P17031 533 aaPredicted RBP10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 GP5P40197 560 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 HARS2P49590 506 aaKnown RBP10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 PLK1P53350 603 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 CD300CQ08708 224 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 BOLA3Q53S33 107 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 PRAMEF18Q5VWM3 479 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 KDELC2Q7Z4H8 507 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 PNPLA1Q8N8W4 532 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 NSUN6Q8TEA1 469 aaKnown RBP10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 HTR3CQ8WXA8 447 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 LZICQ8WZA0 190 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 FAM149B1Q96BN6 582 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 MCRS1Q96EZ8 462 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 OSBPL6Q9BZF3 934 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 NAA50Q9GZZ1 169 aaKnown RBP10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 STN1Q9H668 368 aaKnown RBP10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 TRPC7Q9HCX4 862 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 IARS2Q9NSE4 1012 aaKnown RBP10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 BCAP29Q9UHQ4 241 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 CDYLQ9Y232 598 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 SNX9Q9Y5X1 595 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 BCLAF3A2AJT9 711 aaKnown RBP10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 KPNA7A9QM74 516 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 RNF103O00237 685 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 HCRTO43612 131 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 ZBTB11O95625 1053 aaPredicted RBP10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 OCM2P0CE71 109 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 OCMP0CE72 109 aaPredicted RBP10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 ACAT1P24752 427 aaKnown RBP10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 CDH5P33151 784 aaPredicted RBP10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 CDK9P50750 372 aaKnown RBP10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 RPL14P50914 215 aaKnown RBP10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 CSE1LP55060 971 aaKnown RBP10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 PSME3P61289 254 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 NME3Q13232 169 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 PRPSAP1Q14558 356 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 GOLGA7BQ2TAP0 167 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 ZFP1Q6P2D0 407 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 UTS2BQ765I0 119 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 C1orf127Q8N9H9 656 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 MCUQ8NE86 351 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 CERS2Q96G23 380 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 ACE2Q9BYF1 805 aaPredicted RBP10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 FRMD8Q9BZ67 464 aaPredicted RBP10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 FAM96AQ9H5X1 160 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 PLGRKTQ9HBL7 147 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 INIPQ9NRY2 104 aa10.03□□□□□ -0.8
PTCHD4-202ENST00000398738 TRNAU1APQ9NX07 287 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms