RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 LRIG1Q96JA1 1093 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 KLHL15Q96M94 604 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 KLHL32Q96NJ5 620 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 PRAM1Q96QH2 718 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 HIST1H2AAQ96QV6 131 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 NTPCRQ9BSD7 190 aaKnown RBP3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 CRACR2AQ9BSW2 395 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 SLC25A23Q9BV35 468 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 FAM129AQ9BZQ8 928 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 KRT23Q9C075 422 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 REXO4Q9GZR2 422 aaKnown RBP3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 NT5C3AQ9H0P0 336 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 PCED1AQ9H1Q7 454 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 POLR1BQ9H9Y6 1135 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 KCNK9Q9NPC2 374 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 ABCB8Q9NUT2 735 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 CHCHD3Q9NX63 227 aaKnown RBP3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 ETAA1Q9NY74 926 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 WSB2Q9NYS7 404 aaPredicted RBP3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 LRIT1Q9P2V4 623 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 DKK3Q9UBP4 350 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 EXTL2Q9UBQ6 330 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 FBXL17Q9UF56 701 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 TRPC5Q9UL62 973 aaPredicted RBP3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 FAM184BQ9ULE4 1060 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 OAZ3Q9UMX2 235 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 MTMR6Q9Y217 621 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 KIF3AQ9Y496 699 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 TESMINQ9Y4I5 508 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 ANGPTL3Q9Y5C1 460 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 PCDHA10Q9Y5I2 948 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 CAPN7Q9Y6W3 813 aa3.38□□□□□ -1.87
RPS4XP3-201ENST00000398541 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 CXorf49A8MYA2 514 aaPredicted RBP3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 M0QYT0 321 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 PER2O15055 1255 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 PJA2O43164 708 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 PAPSS1O43252 624 aaPredicted RBP3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 ZBTB43O43298 467 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 CTIFO43310 598 aaKnown RBP3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 TLR2O60603 784 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 CDC14BO60729 498 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 DIAPH2O60879 1101 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 SMPD2O60906 423 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 SIX3O95343 332 aaPredicted RBP3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 DDAH2O95865 285 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 FSHBP01225 129 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 ZNF8P17098 575 aaPredicted RBP3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 ERCC2P18074 760 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 CASTP20810 708 aaKnown RBP3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 TACR2P21452 398 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 COMTP21964 271 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 PTPN3P26045 913 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 TNFRSF8P28908 595 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 HSPA4P34932 840 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 ACAA2P42765 397 aaKnown RBP3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 KIR2DL3P43628 341 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 TNNT2P45379 298 aaPredicted RBP3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 GSTM5P46439 218 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 PCP4P48539 62 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 BMXP51813 675 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 LUMP51884 338 aaPredicted RBP3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 ARFIP1P53367 373 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 PMS2P54278 862 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 LOXL3P58215 753 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 LILRA4P59901 499 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 ARF5P84085 180 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 EFNB1P98172 346 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 TIAL1Q01085 375 aaKnown RBP eCLIP3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 ZBTB16Q05516 673 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 LMAN2Q12907 356 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 CSTF3Q12996 717 aaKnown RBP3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 IL11RAQ14626 422 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 TBR1Q16650 682 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 AAK1Q2M2I8 961 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 PTCHD3Q3KNS1 767 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 ANKRD20A4Q4UJ75 823 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 RUNDC3AQ59EK9 446 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 ANKRD20A8PQ5CZ79 823 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 TMEM196Q5HYL7 178 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 ANKRD20A2Q5SQ80 823 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 ANKRD20A1Q5TYW2 823 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 FAM171A1Q5VUB5 890 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 ANKRD20A3Q5VUR7 823 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 KIAA0930Q6ICG6 404 aaPredicted RBP3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 JADE1Q6IE81 842 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 TMEM81Q6P7N7 255 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 CRIP3Q6Q6R5 217 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 OLFM4Q6UX06 510 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 ADCK1Q86TW2 530 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 FUKQ8N0W3 1084 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 SPARTQ8N0X7 666 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 SIX6OS1Q8N1H7 587 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 PLD5Q8N7P1 536 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 ATAD1Q8NBU5 361 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 SLC16A11Q8NCK7 471 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 PDPRQ8NCN5 879 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 SLC17A8Q8NDX2 589 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 SHC3Q92529 594 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms