RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 TMEM132BQ14DG7 1078 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 ARHGEF6Q15052 776 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 CTXN3Q4LDR2 81 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 PIGWQ7Z7B1 504 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 ELMOD1Q8N336 334 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 FBXO30Q8TB52 745 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 UTP15Q8TED0 518 aaKnown RBP10.91□□□□□ -0.66
CCDC40-204ENST00000397545 SLC44A1Q8WWI5 657 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 BORCS6Q96GS4 357 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 SENP8Q96LD8 212 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 BDH2Q9BUT1 245 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 POPDC2Q9HBU9 364 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 ZDHHC18Q9NUE0 388 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 TRHDEQ9UKU6 1024 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 NR2E3Q9Y5X4 410 aa10.91□□□□□ -0.66
CCDC40-204ENST00000397545 F8W810 466 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 ZNF862O60290 1169 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 NOS2P35228 1153 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 CDKN2BP42772 138 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 TTLL9Q3SXZ7 439 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 CERCAMQ5T4B2 595 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 DCAF12L1Q5VU92 463 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 RFWD3Q6PCD5 774 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 TSPAN14Q8NG11 270 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 OR52K2Q8NGK3 314 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 TRPC4APQ8TEL6 797 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 P2RY11Q96G91 374 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 DPY30Q9C005 99 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 PIDD1Q9HB75 910 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 VPS28Q9UK41 221 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 AP4B1Q9Y6B7 739 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 TFEBP19484 476 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 RGS2P41220 211 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 HALP42357 657 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 BLVRAP53004 296 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 LSM3P62310 102 aaKnown RBP10.9□□□□□ -0.66
CCDC40-204ENST00000397545 CDC16Q13042 620 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 DCTN2Q13561 401 aaKnown RBP10.9□□□□□ -0.66
CCDC40-204ENST00000397545 SLC5A9Q2M3M2 681 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 HSDL1Q3SXM5 330 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 DPY19L2P1Q6NXN4 242 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 VSTM1Q6UX27 236 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 B3GNT6Q6ZMB0 384 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 ZDHHC17Q8IUH5 632 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 PLEKHA8Q96JA3 519 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 ZFRQ96KR1 1074 aaKnown RBP10.9□□□□□ -0.66
CCDC40-204ENST00000397545 NPAS2Q99743 824 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 TBL1YQ9BQ87 522 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 ELOVL6Q9H5J4 265 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 USE1Q9NZ43 259 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 BTRCQ9Y297 605 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 VPS9D1Q9Y2B5 631 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 PLLPQ9Y342 182 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 PCDHA11Q9Y5I1 949 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 LGALS2P05162 132 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 FRG1Q14331 258 aaKnown RBP10.9□□□□□ -0.66
CCDC40-204ENST00000397545 CCDC142Q17RM4 750 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 FAM98BQ52LJ0 330 aaKnown RBP10.9□□□□□ -0.66
CCDC40-204ENST00000397545 C12orf56Q8IXR9 622 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 MYO1HQ8N1T3 1032 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 PARP8Q8N3A8 854 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 TFAP2BQ92481 460 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 DMAC2Q9NW81 257 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 TAS2R1Q9NYW7 299 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 DAPK2Q9UIK4 370 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 ZNF541Q9H0D2 1346 aa10.9□□□□□ -0.66
CCDC40-204ENST00000397545 A0A087WXM4 84 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 CCDC154A6NI56 674 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 HACD1B0YJ81 288 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 CRTAMO95727 393 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 CETPP11597 493 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 PTPN1P18031 435 aaKnown RBP10.89□□□□□ -0.67
CCDC40-204ENST00000397545 MPSTP25325 297 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 RPL5P46777 297 aaKnown RBP10.89□□□□□ -0.67
CCDC40-204ENST00000397545 CPT1AP50416 773 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 RINLQ6ZS11 566 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 MON1BQ7L1V2 547 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 ARCQ7LC44 396 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 NECAB2Q7Z6G3 386 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 CARNMT1Q8N4J0 409 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 PLEKHO2Q8TD55 490 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 CADM1Q9BY67 442 aaKnown RBP10.89□□□□□ -0.67
CCDC40-204ENST00000397545 IL22Q9GZX6 179 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 TBC1D13Q9NVG8 400 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-204ENST00000397545 TAS2R13Q9NYV9 303 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 SH3BP1Q9Y3L3 701 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 QSER1Q2KHR3 1735 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 ATXN2Q99700 1313 aaKnown RBP10.89□□□□□ -0.67
CCDC40-204ENST00000397545 CKMP06732 381 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 ABCB1P08183 1280 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-204ENST00000397545 PIK3R1P27986 724 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 GDF10P55107 478 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 C21orf59P57076 290 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 CCDC15Q0P6D6 951 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 WASHC5Q12768 1159 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 PTGR2Q8N8N7 351 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-204ENST00000397545 SPPL2AQ8TCT8 520 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 ZFYVE19Q96K21 471 aa10.89□□□□□ -0.67
CCDC40-204ENST00000397545 TEPSINQ96N21 525 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms