RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 IRF5Q13568 498 aa6.66□□□□□ -1.34
BDNF-203ENST00000395978 UBAP2LQ14157 1087 aaKnown RBP6.66□□□□□ -1.34
BDNF-203ENST00000395978 EP400NLQ6ZTU2 488 aa6.66□□□□□ -1.34
BDNF-203ENST00000395978 OTOP3Q7RTS5 596 aa6.66□□□□□ -1.34
BDNF-203ENST00000395978 PIWIL4Q7Z3Z4 852 aaKnown RBP6.66□□□□□ -1.34
BDNF-203ENST00000395978 CAND1Q86VP6 1230 aaKnown RBP6.66□□□□□ -1.34
BDNF-203ENST00000395978 FAM228AQ86W67 206 aa6.66□□□□□ -1.34
BDNF-203ENST00000395978 OSTM1Q86WC4 334 aa6.66□□□□□ -1.34
BDNF-203ENST00000395978 SLC41A1Q8IVJ1 513 aa6.66□□□□□ -1.34
BDNF-203ENST00000395978 ARFGAP1Q8N6T3 406 aa6.66□□□□□ -1.34
BDNF-203ENST00000395978 RDH11Q8TC12 318 aa6.66□□□□□ -1.34
BDNF-203ENST00000395978 TUBGCP3Q96CW5 907 aa6.66□□□□□ -1.34
BDNF-203ENST00000395978 TEKT5Q96M29 485 aa6.66□□□□□ -1.34
BDNF-203ENST00000395978 NPY6RQ99463 290 aa6.66□□□□□ -1.34
BDNF-203ENST00000395978 ZYG11BQ9C0D3 744 aa6.66□□□□□ -1.34
BDNF-203ENST00000395978 ADAMTS10Q9H324 1103 aa6.66□□□□□ -1.34
BDNF-203ENST00000395978 DENND2DQ9H6A0 471 aaPredicted RBP6.66□□□□□ -1.34
BDNF-203ENST00000395978 YY1AP1Q9H869 796 aa6.66□□□□□ -1.34
BDNF-203ENST00000395978 TRPC7Q9HCX4 862 aa6.66□□□□□ -1.34
BDNF-203ENST00000395978 RGS18Q9NS28 235 aa6.66□□□□□ -1.34
BDNF-203ENST00000395978 CD274Q9NZQ7 290 aa6.66□□□□□ -1.34
BDNF-203ENST00000395978 TSR3Q9UJK0 312 aaKnown RBP6.66□□□□□ -1.34
BDNF-203ENST00000395978 LSM7Q9UK45 103 aaKnown RBP6.66□□□□□ -1.34
BDNF-203ENST00000395978 DTNAQ9Y4J8 743 aa6.66□□□□□ -1.34
BDNF-203ENST00000395978 ANKRD31Q8N7Z5 1873 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 A0A087X1B8 175 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 VPS26AO75436 327 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 RHOCP08134 193 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 ATP5F1P24539 256 aaPredicted RBP6.65□□□□□ -1.34
BDNF-203ENST00000395978 NFKBIAP25963 317 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 GRIA4P48058 902 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 INPP5AQ14642 412 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 PRKD1Q15139 912 aaPredicted RBP6.65□□□□□ -1.34
BDNF-203ENST00000395978 CCL14Q16627 93 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 IMPG1Q17R60 797 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.65□□□□□ -1.34
BDNF-203ENST00000395978 TIGD5Q53EQ6 642 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 AGKQ53H12 422 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 PTRHD1Q6GMV3 140 aaKnown RBP6.65□□□□□ -1.34
BDNF-203ENST00000395978 NET1Q7Z628 596 aaPredicted RBP6.65□□□□□ -1.34
BDNF-203ENST00000395978 TAC4Q86UU9 113 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 PDZD8Q8NEN9 1154 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 GIPC2Q8TF65 315 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 KCNN1Q92952 543 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 RBBP8Q99708 897 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 POLR1EQ9GZS1 481 aaKnown RBP6.65□□□□□ -1.34
BDNF-203ENST00000395978 MAN1C1Q9NR34 630 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 GID8Q9NWU2 228 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 MPP6Q9NZW5 540 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 TMEM216Q9P0N5 145 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 NRXN2Q9P2S2 1712 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 TRMT6Q9UJA5 497 aaKnown RBP6.65□□□□□ -1.34
BDNF-203ENST00000395978 SLC8A2Q9UPR5 921 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 AURKCQ9UQB9 309 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 Q9Y3F1 56 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 PKP3Q9Y446 797 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 QSER1Q2KHR3 1735 aa6.65□□□□□ -1.34
BDNF-203ENST00000395978 TRAFD1O14545 582 aaPredicted RBP6.65□□□□□ -1.35
BDNF-203ENST00000395978 KLF11O14901 512 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 MSI1O43347 362 aaKnown RBP6.65□□□□□ -1.35
BDNF-203ENST00000395978 TFE3P19532 575 aaPredicted RBP6.65□□□□□ -1.35
BDNF-203ENST00000395978 CCNCP24863 283 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 HTR7P34969 479 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 CD86P42081 329 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 HCAR3P49019 387 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 RGS4P49798 205 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 PLK1P53350 603 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 RABGGTBP53611 331 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 USP4Q13107 963 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 MSLNQ13421 630 aaPredicted RBP6.65□□□□□ -1.35
BDNF-203ENST00000395978 PTK2BQ14289 1009 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 DDR2Q16832 855 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 ACCSLQ4AC99 568 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 SDHAF4Q5VUM1 108 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 LIPMQ5VYY2 423 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 RAP1GAP2Q684P5 730 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 HFE2Q6ZVN8 426 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 IFNEQ86WN2 208 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 LGI2Q8N0V4 545 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 TMEM130Q8N3G9 435 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 GALNT4Q8N4A0 578 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 MIPOL1Q8TD10 442 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 TMEM169Q96HH4 297 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 FGD4Q96M96 766 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 CDK5RAP1Q96SZ6 601 aaKnown RBP6.65□□□□□ -1.35
BDNF-203ENST00000395978 CDRT15Q96T59 188 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 TRIM54Q9BYV2 358 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 TAS2R1Q9NYW7 299 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 PDP2Q9P2J9 529 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 XPR1Q9UBH6 696 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 RNF112Q9ULX5 631 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 BHMG1C9JSJ3 638 aaPredicted RBP6.65□□□□□ -1.35
BDNF-203ENST00000395978 CBX4O00257 560 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 ABLIM1O14639 778 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 CSPG5O95196 566 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 ASGR1P07306 291 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 HMOX2P30519 316 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 PSEN1P49768 467 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 CLCN5P51795 746 aa6.65□□□□□ -1.35
BDNF-203ENST00000395978 PDE1CQ14123 709 aaPredicted RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms