RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 KDELR1P24390 212 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 SERPINB6P35237 376 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 PSMD8P48556 350 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 KIF5AQ12840 1032 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 INO80DQ53TQ3 878 aaPredicted RBP19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 ANKRD20A8PQ5CZ79 823 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 CARD16Q5EG05 197 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 PMS2CLQ68D20 193 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 ARHGAP12Q8IWW6 846 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 OR2A12Q8NGT7 310 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 TPCN2Q8NHX9 752 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 TOE1Q96GM8 510 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 OMDQ99983 421 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 HINFPQ9BQA5 517 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 ZNF670Q9BS34 389 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 LACRTQ9GZZ8 138 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 KLHL11Q9NVR0 708 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 FBXL12Q9NXK8 326 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 DDX56Q9NY93 547 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 HYOU1Q9Y4L1 999 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 DUSP10Q9Y6W6 482 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 VPS13AQ96RL7 3174 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 DMDP11532 3685 aa19.36■□□□□ 0.69
PDLIM7-204ENST00000393546 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.35■□□□□ 0.69
PDLIM7-204ENST00000393546 C1QTNF3-AMACRE9PGA6 284 aa19.35■□□□□ 0.69
PDLIM7-204ENST00000393546 ZNF821O75541 412 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-204ENST00000393546 CHRNA3P32297 505 aa19.35■□□□□ 0.69
PDLIM7-204ENST00000393546 DHPSP49366 369 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-204ENST00000393546 C11orf63Q6NUN7 778 aa19.35■□□□□ 0.69
PDLIM7-204ENST00000393546 USP30Q70CQ3 517 aa19.35■□□□□ 0.69
PDLIM7-204ENST00000393546 DAAM2Q86T65 1068 aa19.35■□□□□ 0.69
PDLIM7-204ENST00000393546 FAM124AQ86V42 546 aa19.35■□□□□ 0.69
PDLIM7-204ENST00000393546 LRRC8AQ8IWT6 810 aa19.35■□□□□ 0.69
PDLIM7-204ENST00000393546 PLPP6Q8IY26 295 aa19.35■□□□□ 0.69
PDLIM7-204ENST00000393546 TMEFF1Q8IYR6 380 aa19.35■□□□□ 0.69
PDLIM7-204ENST00000393546 NPWQ8N729 165 aa19.35■□□□□ 0.69
PDLIM7-204ENST00000393546 RAPGEF5Q92565 580 aa19.35■□□□□ 0.69
PDLIM7-204ENST00000393546 DESI2Q9BSY9 194 aa19.35■□□□□ 0.69
PDLIM7-204ENST00000393546 UBA2Q9UBT2 640 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-204ENST00000393546 SALL4Q9UJQ4 1053 aa19.35■□□□□ 0.69
PDLIM7-204ENST00000393546 PPM1HQ9ULR3 514 aa19.35■□□□□ 0.69
PDLIM7-204ENST00000393546 MYO15AQ9UKN7 3530 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 LRRD1A4D1F6 860 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 J3KR12 359 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 ARHGAP6O43182 974 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 NRDCO43847 1150 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 PRAMEF11O60813 436 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 PRNPP04156 253 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 SNRPD1P62314 119 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 IL10RBQ08334 325 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 IFI16Q16666 785 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 DPY19L3Q6ZPD9 716 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 HDDC3Q8N4P3 179 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 DEFB119Q8N690 84 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 NETO2Q8NC67 525 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 TMIEQ8NEW7 156 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 PCDH19Q8TAB3 1148 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 PIP4K2CQ8TBX8 421 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 ANP32BQ92688 251 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 HEPHQ9BQS7 1158 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 GPR174Q9BXC1 333 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 MAK16Q9BXY0 300 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 BTBD1Q9H0C5 482 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 SP110Q9HB58 689 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 SGK2Q9HBY8 427 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 IPO11Q9UI26 975 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 MFHAS1Q9Y4C4 1052 aa19.34■□□□□ 0.69
PDLIM7-204ENST00000393546 RIF1Q5UIP0 2472 aaKnown RBP19.33■□□□□ 0.69
PDLIM7-204ENST00000393546 GPR179Q6PRD1 2367 aa19.33■□□□□ 0.69
PDLIM7-204ENST00000393546 A0A1W2PP55 124 aa19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 PSTPIP1O43586 416 aa19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 RNASEH2AO75792 299 aaKnown RBP19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 TMCC1O94876 653 aa19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 EPN2O95208 641 aa19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 GSRP00390 522 aa19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 KRT1P04264 644 aa19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 VSIG1Q86XK7 387 aa19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 RYBPQ8N488 228 aaPredicted RBP19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 CHST14Q8NCH0 376 aa19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 FOXJ1Q92949 421 aa19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 FAF2Q96CS3 445 aa19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 RNF157Q96PX1 679 aa19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 TM6SF2Q9BZW4 377 aa19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 ARRDC1-AS1Q9H2J1 176 aa19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 GOLPH3Q9H4A6 298 aa19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 PDFQ9HBH1 243 aa19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 HECAQ9UBI9 543 aaPredicted RBP19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 IL36AQ9UHA7 158 aa19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 SARDHQ9UL12 918 aa19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 PCDHGA5Q9Y5G8 931 aa19.33■□□□□ 0.68
PDLIM7-204ENST00000393546 ZNF487B1APH4 448 aa19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 ACSL1P33121 698 aa19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 CCNHP51946 323 aaPredicted RBP19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 RHOAP61586 193 aa19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 CREB5Q02930 508 aa19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 PAFAH1B3Q15102 231 aaKnown RBP19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 CYTH1Q15438 398 aa19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 ARSIQ5FYB1 569 aa19.32■□□□□ 0.68
PDLIM7-204ENST00000393546 ARMCX6Q7L4S7 300 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms