RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 FATE1Q969F0 183 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 SIPA1Q96FS4 1042 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 HMCESQ96FZ2 354 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 ZNF599Q96NL3 588 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 ALS2CR12Q96Q35 445 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 SLC39A8Q9C0K1 460 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 BRD8Q9H0E9 1235 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 RSPH9Q9H1X1 276 aaPredicted RBP6.9□□□□□ -1.3
UBBP1-201ENST00000392399 ZDHHC4Q9NPG8 344 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 PRSS16Q9NQE7 514 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 C2orf42Q9NWW7 574 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 BCCIPQ9P287 314 aaKnown RBP eCLIP6.9□□□□□ -1.3
UBBP1-201ENST00000392399 IPO11Q9UI26 975 aaKnown RBP6.9□□□□□ -1.3
UBBP1-201ENST00000392399 HYOU1Q9Y4L1 999 aa6.9□□□□□ -1.3
UBBP1-201ENST00000392399 VPS13AQ96RL7 3174 aa6.9□□□□□ -1.31
UBBP1-201ENST00000392399 GOLGA6L9A6NEM1 432 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 DFFAO00273 331 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 APOL1O14791 398 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 LILRB5O75023 590 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 SIN3BO75182 1162 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 POP4O95707 220 aaKnown RBP6.89□□□□□ -1.31
UBBP1-201ENST00000392399 CD160O95971 181 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 GSRP00390 522 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 MT-CO1P00395 513 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 DNTTP04053 509 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 ACADMP11310 421 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 HLA-EP13747 358 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 TNNT1P13805 278 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 GABRG2P18507 467 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 COL9A1P20849 921 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 GLDCP23378 1020 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 CCNCP24863 283 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 MSNP26038 577 aaKnown RBP6.89□□□□□ -1.31
UBBP1-201ENST00000392399 OXTRP30559 389 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 PTPN7P35236 360 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 CDKN2BP42772 138 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 STK19P49842 368 aaPredicted RBP6.89□□□□□ -1.31
UBBP1-201ENST00000392399 RENBPP51606 427 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 COPAP53621 1224 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 SNRPD1P62314 119 aaKnown RBP6.89□□□□□ -1.31
UBBP1-201ENST00000392399 RAD51Q06609 339 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 NSUN2Q08J23 767 aaKnown RBP eCLIP6.89□□□□□ -1.31
UBBP1-201ENST00000392399 HNRNPDQ14103 355 aaKnown RBP6.89□□□□□ -1.31
UBBP1-201ENST00000392399 CARD16Q5EG05 197 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 SPDYCQ5MJ68 293 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 FAM46CQ5VWP2 391 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 DMRTA1Q5VZB9 504 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 ZNF776Q68DI1 518 aaPredicted RBP6.89□□□□□ -1.31
UBBP1-201ENST00000392399 NCBP2-AS2Q69YL0 99 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 ANO7Q6IWH7 933 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 TIGD7Q6NT04 549 aaPredicted RBP6.89□□□□□ -1.31
UBBP1-201ENST00000392399 KIAA1211LQ6NV74 962 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 TSSK4Q6SA08 328 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 MFSD7Q6UXD7 560 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 SPOCD1Q6ZMY3 1216 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 KBTBD6Q86V97 674 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 PGBD3Q8N328 593 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 BBS5Q8N3I7 341 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 PQLC3Q8N755 202 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 TMIEQ8NEW7 156 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 PRSS33Q8NF86 280 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 MDGA1Q8NFP4 955 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 HMGB4Q8WW32 186 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 ATOH1Q92858 354 aaPredicted RBP6.89□□□□□ -1.31
UBBP1-201ENST00000392399 HES6Q96HZ4 224 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 CELF6Q96J87 481 aaKnown RBP6.89□□□□□ -1.31
UBBP1-201ENST00000392399 LRIG1Q96JA1 1093 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 MRGPRX1Q96LB2 322 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 ZNF830Q96NB3 372 aaPredicted RBP6.89□□□□□ -1.31
UBBP1-201ENST00000392399 TSGA13Q96PP4 275 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 HHIPQ96QV1 700 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 FAM129BQ96TA1 746 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 MKRN2Q9H000 416 aaKnown RBP6.89□□□□□ -1.31
UBBP1-201ENST00000392399 GOLPH3Q9H4A6 298 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 SP110Q9HB58 689 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 PDFQ9HBH1 243 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 LZTFL1Q9NQ48 299 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 ITM2CQ9NQX7 267 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 KCND1Q9NSA2 647 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 ETNK2Q9NVF9 386 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 HAUS2Q9NVX0 235 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 UBA2Q9UBT2 640 aaPredicted RBP6.89□□□□□ -1.31
UBBP1-201ENST00000392399 TRIM10Q9UDY6 481 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 AMACRQ9UHK6 382 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 KMT2EQ8IZD2 1858 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 CHD5Q8TDI0 1954 aa6.89□□□□□ -1.31
UBBP1-201ENST00000392399 NUP205Q92621 2012 aa6.88□□□□□ -1.31
UBBP1-201ENST00000392399 hCG_1818297A0A087WSY0 165 aa6.88□□□□□ -1.31
UBBP1-201ENST00000392399 A0A0U1RQJ8 604 aa6.88□□□□□ -1.31
UBBP1-201ENST00000392399 C1QTNF3-AMACRE9PGA6 284 aa6.88□□□□□ -1.31
UBBP1-201ENST00000392399 J3KR12 359 aa6.88□□□□□ -1.31
UBBP1-201ENST00000392399 PPP1R12AO14974 1030 aaPredicted RBP6.88□□□□□ -1.31
UBBP1-201ENST00000392399 MATN3O15232 486 aa6.88□□□□□ -1.31
UBBP1-201ENST00000392399 SMAD6O43541 496 aaKnown RBP6.88□□□□□ -1.31
UBBP1-201ENST00000392399 HRO43593 1189 aa6.88□□□□□ -1.31
UBBP1-201ENST00000392399 ZNF500O60304 480 aaPredicted RBP6.88□□□□□ -1.31
UBBP1-201ENST00000392399 MAFKO60675 156 aa6.88□□□□□ -1.31
UBBP1-201ENST00000392399 CST8O60676 142 aa6.88□□□□□ -1.31
UBBP1-201ENST00000392399 ZNF821O75541 412 aaPredicted RBP6.88□□□□□ -1.31
UBBP1-201ENST00000392399 ZNF189O75820 626 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms