RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 AOC1P19801 751 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 TTKP33981 857 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 CDH15P55291 814 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 POLD3Q15054 466 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 PITRM1Q5JRX3 1037 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 SCARA3Q6AZY7 606 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 FSTL4Q6MZW2 842 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 MRNIPQ6NTE8 343 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 APOBEC3FQ8IUX4 373 aaKnown RBP13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 PARP8Q8N3A8 854 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 AGBL3Q8NEM8 1001 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 POPDC2Q9HBU9 364 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 CHRAC1Q9NRG0 131 aa13.32□□□□□ -0.28
TRAPPC9-201ENST00000389328 ASLP04424 464 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 CYP2C9P11712 490 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 CKMT2P17540 419 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 ERCC2P18074 760 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 CDH3P22223 829 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 ATXN1P54253 815 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 CSE1LP55060 971 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 MTTPP55157 894 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 DMPKQ09013 629 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 SFSWAPQ12872 951 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 SQLEQ14534 574 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 PAN2Q504Q3 1202 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 LDLRAP1Q5SW96 308 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 PYROXD2Q8N2H3 581 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 CBR4Q8N4T8 237 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 FBXL18Q96ME1 805 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 C1orf50Q9BV19 199 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 LATS2Q9NRM7 1088 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 ANAPC2Q9UJX6 822 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 TRHDEQ9UKU6 1024 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 MYH3P11055 1940 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 CCR1P32246 355 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 GMPSP49915 693 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 CXCL9Q07325 125 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 LRRC8DQ7L1W4 858 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 OR6J1Q8NGC5 347 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 AGAP2Q99490 1192 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 APOL5Q9BWW9 433 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 TRNAU1APQ9NX07 287 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 ADAMTS6Q9UKP5 1117 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 F9P00740 461 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 CCNA2P20248 432 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 NR4A1P22736 598 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 TTC30AQ86WT1 665 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 NDRG1Q92597 394 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 RBBP8Q99708 897 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 NDEL1Q9GZM8 345 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 SETD4Q9NVD3 440 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 MFSD11O43934 449 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 HS6ST1O60243 411 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 RAB10P61026 200 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 FAM98BQ52LJ0 330 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 PMF1Q6P1K2 205 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 SCIMPQ6UWF3 145 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 SPPL2CQ8IUH8 684 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 KIAA0319LQ8IZA0 1049 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 OFCC1Q8IZS5 231 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 CMASQ8NFW8 434 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 CLEC4DQ8WXI8 215 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 RGS18Q9NS28 235 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 LIMD1Q9UGP4 676 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 SLC8A2Q9UPR5 921 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 MTF2Q9Y483 593 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 FADS3Q9Y5Q0 445 aa13.31□□□□□ -0.28
TRAPPC9-201ENST00000389328 BUD23O43709 281 aaKnown RBP13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 NRP2O60462 931 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 CLASP2O75122 1294 aaKnown RBP13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 MAFO75444 373 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 ZNF286BP0CG31 522 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 GSSP48637 474 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 RAD23AP54725 363 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 DEFA1P59665 94 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 DEFA3P59666 94 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 VAC14Q08AM6 782 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 PFKFB4Q16877 469 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 PRMT9Q6P2P2 845 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 ZDHHC13Q8IUH4 622 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 FNDC5Q8NAU1 212 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 REPS2Q8NFH8 660 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 BORCS5Q969J3 196 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 OSMRQ99650 979 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 CXorf21Q9HAI6 301 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 NENFQ9UMX5 172 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 PKP3Q9Y446 797 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 CCDC154A6NI56 674 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 CTSHP09668 335 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 PNPLA4P41247 253 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 GRM3Q14832 879 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 SAPCD2Q86UD0 394 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 PIGZQ86VD9 579 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 HORMAD1Q86X24 394 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 C1orf127Q8N9H9 656 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 DNERQ8NFT8 737 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 TBL1YQ9BQ87 522 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 BTRCQ9Y297 605 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 C2CD4BA6NLJ0 364 aa13.3□□□□□ -0.28
TRAPPC9-201ENST00000389328 RGS5O15539 181 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms